Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 RNU6-548P-201ENST00000517083 115 ntBASIC2.78□□□□□ -1.96
VARS2Q5ST30 U1.36-201ENST00000620684 176 ntBASIC2.78□□□□□ -1.96
VARS2Q5ST30 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
VARS2Q5ST30 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
VARS2Q5ST30 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
VARS2Q5ST30 RNU6-698P-201ENST00000363523 107 ntBASIC2.77□□□□□ -1.97
VARS2Q5ST30 RNU6-34P-201ENST00000364874 107 ntBASIC2.77□□□□□ -1.97
VARS2Q5ST30 MIR545-201ENST00000385085 106 ntBASIC2.77□□□□□ -1.97
VARS2Q5ST30 SNORD88.1-201ENST00000408684 91 ntBASIC2.77□□□□□ -1.97
VARS2Q5ST30 snoU13.21-201ENST00000459368 105 ntBASIC2.77□□□□□ -1.97
VARS2Q5ST30 AC055731.1-201ENST00000474387 401 ntBASIC2.77□□□□□ -1.97
VARS2Q5ST30 AL133373.1-201ENST00000497098 94 ntBASIC2.77□□□□□ -1.97
VARS2Q5ST30 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.77□□□□□ -1.97
VARS2Q5ST30 AL645939.4-201ENST00000604495 135 ntBASIC2.77□□□□□ -1.97
VARS2Q5ST30 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
VARS2Q5ST30 MIR103A2-201ENST00000362154 78 ntBASIC2.76□□□□□ -1.97
VARS2Q5ST30 RNA5SP425-201ENST00000410336 112 ntBASIC2.76□□□□□ -1.97
VARS2Q5ST30 RNU6-250P-201ENST00000516958 103 ntBASIC2.76□□□□□ -1.97
VARS2Q5ST30 AC008608.1-201ENST00000603910 127 ntBASIC2.76□□□□□ -1.97
VARS2Q5ST30 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
VARS2Q5ST30 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
VARS2Q5ST30 Y_RNA.330-201ENST00000365230 109 ntBASIC2.75□□□□□ -1.97
VARS2Q5ST30 MIR764-201ENST00000390811 85 ntBASIC2.75□□□□□ -1.97
VARS2Q5ST30 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2.75□□□□□ -1.97
VARS2Q5ST30 MIR4648-201ENST00000580107 72 ntBASIC2.75□□□□□ -1.97
VARS2Q5ST30 GHRLOS.1-201ENST00000610995 70 ntBASIC2.75□□□□□ -1.97
VARS2Q5ST30 U4.4-201ENST00000620626 117 ntBASIC2.75□□□□□ -1.97
VARS2Q5ST30 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
VARS2Q5ST30 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
VARS2Q5ST30 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.74□□□□□ -1.97
VARS2Q5ST30 RNA5SP264-201ENST00000363115 107 ntBASIC2.74□□□□□ -1.97
VARS2Q5ST30 RNU6-990P-201ENST00000364385 104 ntBASIC2.74□□□□□ -1.97
VARS2Q5ST30 MIR548C-201ENST00000384815 97 ntBASIC2.74□□□□□ -1.97
VARS2Q5ST30 MIR627-201ENST00000384979 97 ntBASIC2.74□□□□□ -1.97
VARS2Q5ST30 MIR517B-201ENST00000385102 67 ntBASIC2.74□□□□□ -1.97
VARS2Q5ST30 MIR125B2-201ENST00000385128 89 ntBASIC2.74□□□□□ -1.97
VARS2Q5ST30 RNU7-174P-201ENST00000516248 59 ntBASIC2.74□□□□□ -1.97
VARS2Q5ST30 RNA5SP320-201ENST00000516263 124 ntBASIC2.74□□□□□ -1.97
VARS2Q5ST30 AC019176.1-201ENST00000518519 225 ntBASIC2.74□□□□□ -1.97
VARS2Q5ST30 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
VARS2Q5ST30 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
VARS2Q5ST30 MIR617-201ENST00000385030 97 ntBASIC2.73□□□□□ -1.97
VARS2Q5ST30 MIR27B-201ENST00000385129 97 ntBASIC2.73□□□□□ -1.97
VARS2Q5ST30 MIR1289-2-201ENST00000408360 111 ntBASIC2.73□□□□□ -1.97
VARS2Q5ST30 RNU6-231P-201ENST00000517122 103 ntBASIC2.73□□□□□ -1.97
VARS2Q5ST30 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.73□□□□□ -1.97
VARS2Q5ST30 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
VARS2Q5ST30 Y_RNA.250-201ENST00000364542 110 ntBASIC2.72□□□□□ -1.97
VARS2Q5ST30 RNU4-53P-201ENST00000410828 140 ntBASIC2.72□□□□□ -1.97
VARS2Q5ST30 SNORD83.1-201ENST00000411362 77 ntBASIC2.72□□□□□ -1.97
VARS2Q5ST30 RNA5SP99-201ENST00000364020 114 ntBASIC2.71□□□□□ -1.98
VARS2Q5ST30 RNU6-1162P-201ENST00000384443 104 ntBASIC2.71□□□□□ -1.98
VARS2Q5ST30 AC067940.1-201ENST00000458411 300 ntBASIC2.71□□□□□ -1.98
VARS2Q5ST30 FO624990.1-201ENST00000636373 85 ntBASIC2.71□□□□□ -1.98
VARS2Q5ST30 RNU6-838P-201ENST00000363399 108 ntBASIC2.7□□□□□ -1.98
VARS2Q5ST30 MIR521-2-201ENST00000384818 87 ntBASIC2.7□□□□□ -1.98
VARS2Q5ST30 AC092427.1-202ENST00000430569 476 ntBASIC2.7□□□□□ -1.98
VARS2Q5ST30 RNU6ATAC14P-201ENST00000516218 91 ntBASIC2.7□□□□□ -1.98
VARS2Q5ST30 MIR548X-201ENST00000580069 75 ntBASIC2.7□□□□□ -1.98
VARS2Q5ST30 RNA5SP289-201ENST00000362332 137 ntBASIC2.69□□□□□ -1.98
VARS2Q5ST30 RNA5SP403-201ENST00000363598 108 ntBASIC2.69□□□□□ -1.98
VARS2Q5ST30 RNU6-1250P-201ENST00000391218 107 ntBASIC2.69□□□□□ -1.98
VARS2Q5ST30 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.69□□□□□ -1.98
VARS2Q5ST30 RNU6-947P-201ENST00000516264 106 ntBASIC2.69□□□□□ -1.98
VARS2Q5ST30 AC018659.1-201ENST00000551083 169 ntBASIC2.69□□□□□ -1.98
VARS2Q5ST30 U2.7-201ENST00000619197 100 ntBASIC2.69□□□□□ -1.98
VARS2Q5ST30 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.69□□□□□ -1.98
VARS2Q5ST30 RNU6V-201ENST00000384105 107 ntBASIC2.68□□□□□ -1.98
VARS2Q5ST30 SNORA41B-201ENST00000384785 128 ntBASIC2.68□□□□□ -1.98
VARS2Q5ST30 MIR519E-201ENST00000385075 84 ntBASIC2.68□□□□□ -1.98
VARS2Q5ST30 RNA5SP210-201ENST00000391034 120 ntBASIC2.68□□□□□ -1.98
VARS2Q5ST30 AC021146.9-201ENST00000512503 156 ntBASIC2.68□□□□□ -1.98
VARS2Q5ST30 RNA5SP458-201ENST00000516188 119 ntBASIC2.68□□□□□ -1.98
VARS2Q5ST30 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.68□□□□□ -1.98
VARS2Q5ST30 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
VARS2Q5ST30 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
VARS2Q5ST30 RN7SKP223-201ENST00000410582 62 ntBASIC2.67□□□□□ -1.98
VARS2Q5ST30 SNORA40.16-201ENST00000517238 121 ntBASIC2.67□□□□□ -1.98
VARS2Q5ST30 AL353997.5-201ENST00000618886 171 ntBASIC2.67□□□□□ -1.98
VARS2Q5ST30 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.66□□□□□ -1.98
VARS2Q5ST30 RNU6-934P-201ENST00000365154 107 ntBASIC2.66□□□□□ -1.98
VARS2Q5ST30 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.66□□□□□ -1.98
VARS2Q5ST30 SUMO1P4-201ENST00000429430 302 ntBASIC2.66□□□□□ -1.98
VARS2Q5ST30 MIR4446-201ENST00000578505 67 ntBASIC2.66□□□□□ -1.98
VARS2Q5ST30 MIR7111-201ENST00000619751 72 ntBASIC2.66□□□□□ -1.98
VARS2Q5ST30 AC010297.1-201ENST00000623948 149 ntBASIC2.66□□□□□ -1.98
VARS2Q5ST30 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.66□□□□□ -1.98
VARS2Q5ST30 RNA5SP393-201ENST00000363423 117 ntBASIC2.65□□□□□ -1.99
VARS2Q5ST30 RNU6-724P-201ENST00000390958 105 ntBASIC2.65□□□□□ -1.99
VARS2Q5ST30 MIR4771-2-201ENST00000577758 74 ntBASIC2.65□□□□□ -1.99
VARS2Q5ST30 MIR4771-1-201ENST00000582617 74 ntBASIC2.65□□□□□ -1.99
VARS2Q5ST30 ZNF355P-201ENST00000427301 3216 ntBASIC2.65□□□□□ -1.99
VARS2Q5ST30 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
VARS2Q5ST30 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.64□□□□□ -1.99
VARS2Q5ST30 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.64□□□□□ -1.99
VARS2Q5ST30 Y_RNA.224-201ENST00000364308 111 ntBASIC2.64□□□□□ -1.99
VARS2Q5ST30 SNORD114-30-201ENST00000364448 72 ntBASIC2.64□□□□□ -1.99
VARS2Q5ST30 RNU6-994P-201ENST00000410507 111 ntBASIC2.64□□□□□ -1.99
VARS2Q5ST30 JTBP1-201ENST00000441314 247 ntBASIC2.64□□□□□ -1.99
VARS2Q5ST30 MIR5092-201ENST00000583139 88 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 195.5 ms