Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 AL021368.2-201ENST00000606125 5352 ntBASIC4.4□□□□□ -1.7
SCAF1Q9H7N4 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
SCAF1Q9H7N4 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SCAF1Q9H7N4 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
SCAF1Q9H7N4 MIR764-201ENST00000390811 85 ntBASIC4.4□□□□□ -1.71
SCAF1Q9H7N4 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SCAF1Q9H7N4 RNA5SP99-201ENST00000364020 114 ntBASIC4.39□□□□□ -1.71
SCAF1Q9H7N4 SNORD115-44-201ENST00000365391 82 ntBASIC4.39□□□□□ -1.71
SCAF1Q9H7N4 MIR7-2-201ENST00000384970 110 ntBASIC4.39□□□□□ -1.71
SCAF1Q9H7N4 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
SCAF1Q9H7N4 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
SCAF1Q9H7N4 uc_338.1-201ENST00000612113 180 ntBASIC4.38□□□□□ -1.71
SCAF1Q9H7N4 MIR513A1-201ENST00000385138 129 ntBASIC4.37□□□□□ -1.71
SCAF1Q9H7N4 RNU6-482P-201ENST00000391068 107 ntBASIC4.37□□□□□ -1.71
SCAF1Q9H7N4 AC025033.1-201ENST00000463883 194 ntBASIC4.37□□□□□ -1.71
SCAF1Q9H7N4 SNORD53-201ENST00000579969 78 ntBASIC4.37□□□□□ -1.71
SCAF1Q9H7N4 RNU6-54P-201ENST00000365563 107 ntBASIC4.36□□□□□ -1.71
SCAF1Q9H7N4 RNU6-535P-201ENST00000384722 107 ntBASIC4.36□□□□□ -1.71
SCAF1Q9H7N4 AL591806.2-201ENST00000433122 173 ntBASIC4.36□□□□□ -1.71
SCAF1Q9H7N4 AL513328.1-201ENST00000446460 224 ntBASIC4.36□□□□□ -1.71
SCAF1Q9H7N4 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC4.35□□□□□ -1.71
SCAF1Q9H7N4 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
SCAF1Q9H7N4 SNORD109B-201ENST00000458961 67 ntBASIC4.35□□□□□ -1.71
SCAF1Q9H7N4 SNORD109A-201ENST00000459128 67 ntBASIC4.35□□□□□ -1.71
SCAF1Q9H7N4 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
SCAF1Q9H7N4 SNORD83.1-201ENST00000411362 77 ntBASIC4.34□□□□□ -1.71
SCAF1Q9H7N4 AP003716.2-201ENST00000528260 108 ntBASIC4.34□□□□□ -1.71
SCAF1Q9H7N4 MIR622-201ENST00000638396 96 ntBASIC4.34□□□□□ -1.71
SCAF1Q9H7N4 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
SCAF1Q9H7N4 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SCAF1Q9H7N4 SNORD15B-201ENST00000384714 146 ntBASIC4.33□□□□□ -1.72
SCAF1Q9H7N4 SNORD67-201ENST00000390833 111 ntBASIC4.33□□□□□ -1.72
SCAF1Q9H7N4 MIR548AG2-201ENST00000581228 64 ntBASIC4.33□□□□□ -1.72
SCAF1Q9H7N4 MIR103A2-201ENST00000362154 78 ntBASIC4.32□□□□□ -1.72
SCAF1Q9H7N4 MIR22-201ENST00000362190 85 ntBASIC4.32□□□□□ -1.72
SCAF1Q9H7N4 Y_RNA.118-201ENST00000363300 101 ntBASIC4.32□□□□□ -1.72
SCAF1Q9H7N4 RNU7-13P-201ENST00000516413 62 ntBASIC4.32□□□□□ -1.72
SCAF1Q9H7N4 SNORA2.1-201ENST00000363089 137 ntBASIC4.31□□□□□ -1.72
SCAF1Q9H7N4 RNU1-51P-201ENST00000365345 176 ntBASIC4.31□□□□□ -1.72
SCAF1Q9H7N4 MIR627-201ENST00000384979 97 ntBASIC4.31□□□□□ -1.72
SCAF1Q9H7N4 RNU6ATAC6P-201ENST00000408132 126 ntBASIC4.31□□□□□ -1.72
SCAF1Q9H7N4 AC087499.2-201ENST00000432861 149 ntBASIC4.31□□□□□ -1.72
SCAF1Q9H7N4 U1.36-201ENST00000620684 176 ntBASIC4.31□□□□□ -1.72
SCAF1Q9H7N4 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SCAF1Q9H7N4 SNORD88.1-201ENST00000408684 91 ntBASIC4.3□□□□□ -1.72
SCAF1Q9H7N4 SNORD42B-201ENST00000458893 67 ntBASIC4.3□□□□□ -1.72
SCAF1Q9H7N4 AC055731.1-201ENST00000474387 401 ntBASIC4.3□□□□□ -1.72
SCAF1Q9H7N4 RN7SL20P-201ENST00000488827 297 ntBASIC4.3□□□□□ -1.72
SCAF1Q9H7N4 AL133373.1-201ENST00000497098 94 ntBASIC4.3□□□□□ -1.72
SCAF1Q9H7N4 RNU4-33P-201ENST00000364316 85 ntBASIC4.29□□□□□ -1.72
SCAF1Q9H7N4 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC4.29□□□□□ -1.72
SCAF1Q9H7N4 SNORA40.17-201ENST00000517256 115 ntBASIC4.29□□□□□ -1.72
SCAF1Q9H7N4 MIR6739-201ENST00000622461 75 ntBASIC4.29□□□□□ -1.72
SCAF1Q9H7N4 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
SCAF1Q9H7N4 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
SCAF1Q9H7N4 RNU6-990P-201ENST00000364385 104 ntBASIC4.28□□□□□ -1.72
SCAF1Q9H7N4 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
SCAF1Q9H7N4 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
SCAF1Q9H7N4 FTX-214ENST00000638437 12267 ntTSL 5 BASIC4.28□□□□□ -1.72
SCAF1Q9H7N4 MIR548O2-201ENST00000616090 70 ntBASIC4.27□□□□□ -1.73
SCAF1Q9H7N4 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SCAF1Q9H7N4 RNA5SP264-201ENST00000363115 107 ntBASIC4.26□□□□□ -1.73
SCAF1Q9H7N4 RNU6-1126P-201ENST00000384002 107 ntBASIC4.26□□□□□ -1.73
SCAF1Q9H7N4 MIR216B-201ENST00000390186 82 ntBASIC4.26□□□□□ -1.73
SCAF1Q9H7N4 SNORD113-2-201ENST00000391082 72 ntBASIC4.26□□□□□ -1.73
SCAF1Q9H7N4 MIR1289-2-201ENST00000408360 111 ntBASIC4.26□□□□□ -1.73
SCAF1Q9H7N4 MIR548F3-201ENST00000408509 87 ntBASIC4.26□□□□□ -1.73
SCAF1Q9H7N4 AL157398.1-201ENST00000452981 186 ntBASIC4.26□□□□□ -1.73
SCAF1Q9H7N4 AC008608.1-201ENST00000603910 127 ntBASIC4.26□□□□□ -1.73
SCAF1Q9H7N4 AL645939.4-201ENST00000604495 135 ntBASIC4.26□□□□□ -1.73
SCAF1Q9H7N4 GHRLOS.1-201ENST00000610995 70 ntBASIC4.26□□□□□ -1.73
SCAF1Q9H7N4 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SCAF1Q9H7N4 Y_RNA.226-201ENST00000364337 114 ntBASIC4.25□□□□□ -1.73
SCAF1Q9H7N4 SNORA3.2-201ENST00000408221 125 ntBASIC4.25□□□□□ -1.73
SCAF1Q9H7N4 AC244505.6-201ENST00000452829 130 ntBASIC4.25□□□□□ -1.73
SCAF1Q9H7N4 RNA5SP458-201ENST00000516188 119 ntBASIC4.25□□□□□ -1.73
SCAF1Q9H7N4 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
SCAF1Q9H7N4 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SCAF1Q9H7N4 MIR125B2-201ENST00000385128 89 ntBASIC4.24□□□□□ -1.73
SCAF1Q9H7N4 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC4.23□□□□□ -1.73
SCAF1Q9H7N4 Y_RNA.338-201ENST00000365320 114 ntBASIC4.23□□□□□ -1.73
SCAF1Q9H7N4 ZNF658B-202ENST00000615961 3375 ntBASIC4.23□□□□□ -1.73
SCAF1Q9H7N4 AC092427.1-202ENST00000430569 476 ntBASIC4.22□□□□□ -1.73
SCAF1Q9H7N4 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
SCAF1Q9H7N4 AL161935.2-201ENST00000414627 60 ntBASIC4.21□□□□□ -1.73
SCAF1Q9H7N4 AC107016.2-201ENST00000547968 190 ntBASIC4.21□□□□□ -1.73
SCAF1Q9H7N4 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
SCAF1Q9H7N4 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC4.21□□□□□ -1.74
SCAF1Q9H7N4 RNU6-934P-201ENST00000365154 107 ntBASIC4.21□□□□□ -1.74
SCAF1Q9H7N4 MIR545-201ENST00000385085 106 ntBASIC4.21□□□□□ -1.74
SCAF1Q9H7N4 AC067940.1-201ENST00000458411 300 ntBASIC4.21□□□□□ -1.74
SCAF1Q9H7N4 RNU7-119P-201ENST00000459279 63 ntBASIC4.21□□□□□ -1.74
SCAF1Q9H7N4 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SCAF1Q9H7N4 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC4.2□□□□□ -1.74
SCAF1Q9H7N4 MIR517B-201ENST00000385102 67 ntBASIC4.2□□□□□ -1.74
SCAF1Q9H7N4 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SCAF1Q9H7N4 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC4.19□□□□□ -1.74
SCAF1Q9H7N4 MIR4771-2-201ENST00000577758 74 ntBASIC4.19□□□□□ -1.74
SCAF1Q9H7N4 MIR4771-1-201ENST00000582617 74 ntBASIC4.19□□□□□ -1.74
SCAF1Q9H7N4 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 181.5 ms