Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 AL138827.1-201ENST00000402666 306 ntBASIC2.35□□□□□ -2.03
RNF223E7ERA6 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.35□□□□□ -2.03
RNF223E7ERA6 AL513328.1-201ENST00000446460 224 ntBASIC2.35□□□□□ -2.03
RNF223E7ERA6 AC092185.1-201ENST00000491371 97 ntBASIC2.35□□□□□ -2.03
RNF223E7ERA6 RNU7-13P-201ENST00000516413 62 ntBASIC2.35□□□□□ -2.03
RNF223E7ERA6 SNORA31.11-201ENST00000516528 139 ntBASIC2.35□□□□□ -2.03
RNF223E7ERA6 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.35□□□□□ -2.03
RNF223E7ERA6 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
RNF223E7ERA6 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
RNF223E7ERA6 RNU1-112P-201ENST00000364401 164 ntBASIC2.34□□□□□ -2.03
RNF223E7ERA6 SNORA46-201ENST00000384762 135 ntBASIC2.34□□□□□ -2.03
RNF223E7ERA6 MIR887-201ENST00000401258 79 ntBASIC2.34□□□□□ -2.03
RNF223E7ERA6 RNU6-56P-201ENST00000516986 93 ntBASIC2.34□□□□□ -2.03
RNF223E7ERA6 MIR3657-201ENST00000584818 117 ntBASIC2.34□□□□□ -2.03
RNF223E7ERA6 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
RNF223E7ERA6 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
RNF223E7ERA6 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.04
RNF223E7ERA6 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
RNF223E7ERA6 SNORA70B-201ENST00000384210 135 ntBASIC2.33□□□□□ -2.04
RNF223E7ERA6 MIR7-2-201ENST00000384970 110 ntBASIC2.33□□□□□ -2.04
RNF223E7ERA6 MIR4771-2-201ENST00000577758 74 ntBASIC2.33□□□□□ -2.04
RNF223E7ERA6 MIR4771-1-201ENST00000582617 74 ntBASIC2.33□□□□□ -2.04
RNF223E7ERA6 RNU6-92P-201ENST00000605893 104 ntBASIC2.33□□□□□ -2.04
RNF223E7ERA6 MIR6817-201ENST00000615588 66 ntBASIC2.33□□□□□ -2.04
RNF223E7ERA6 RNA5SP68-201ENST00000363885 119 ntBASIC2.32□□□□□ -2.04
RNF223E7ERA6 SNORD113.3-201ENST00000364630 78 ntBASIC2.32□□□□□ -2.04
RNF223E7ERA6 RNU6-1126P-201ENST00000384002 107 ntBASIC2.32□□□□□ -2.04
RNF223E7ERA6 SNORA6-201ENST00000384033 151 ntBASIC2.32□□□□□ -2.04
RNF223E7ERA6 MIR9-1-201ENST00000385198 89 ntBASIC2.32□□□□□ -2.04
RNF223E7ERA6 RN7SKP123-201ENST00000410732 291 ntBASIC2.32□□□□□ -2.04
RNF223E7ERA6 UQCRHP3-201ENST00000451503 251 ntBASIC2.32□□□□□ -2.04
RNF223E7ERA6 RN7SL633P-201ENST00000488974 297 ntBASIC2.32□□□□□ -2.04
RNF223E7ERA6 SNORA77B-201ENST00000578179 125 ntBASIC2.32□□□□□ -2.04
RNF223E7ERA6 SUMO2P12-201ENST00000405924 140 ntBASIC2.31□□□□□ -2.04
RNF223E7ERA6 RNA5SP148-201ENST00000516527 94 ntBASIC2.31□□□□□ -2.04
RNF223E7ERA6 RNU7-193P-201ENST00000516723 65 ntBASIC2.31□□□□□ -2.04
RNF223E7ERA6 SNORA50A-202ENST00000629536 136 ntBASIC2.31□□□□□ -2.04
RNF223E7ERA6 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
RNF223E7ERA6 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
RNF223E7ERA6 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
RNF223E7ERA6 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
RNF223E7ERA6 SNORA3A-201ENST00000364113 130 ntBASIC2.3□□□□□ -2.04
RNF223E7ERA6 RNU6-302P-201ENST00000365249 107 ntBASIC2.3□□□□□ -2.04
RNF223E7ERA6 RNU6-260P-201ENST00000384092 107 ntBASIC2.3□□□□□ -2.04
RNF223E7ERA6 RNA5SP212-201ENST00000391223 107 ntBASIC2.3□□□□□ -2.04
RNF223E7ERA6 RNA5SP21-201ENST00000410917 96 ntBASIC2.3□□□□□ -2.04
RNF223E7ERA6 MIR3664-201ENST00000579074 99 ntBASIC2.3□□□□□ -2.04
RNF223E7ERA6 MIR548AG2-201ENST00000581228 64 ntBASIC2.3□□□□□ -2.04
RNF223E7ERA6 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.3□□□□□ -2.04
RNF223E7ERA6 MIR548O2-201ENST00000616090 70 ntBASIC2.3□□□□□ -2.04
RNF223E7ERA6 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.3□□□□□ -2.04
RNF223E7ERA6 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
RNF223E7ERA6 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.3□□□□□ -2.04
RNF223E7ERA6 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
RNF223E7ERA6 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.29□□□□□ -2.04
RNF223E7ERA6 SNORA67.3-201ENST00000384366 140 ntBASIC2.29□□□□□ -2.04
RNF223E7ERA6 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
RNF223E7ERA6 RNA5SP24-201ENST00000516478 95 ntBASIC2.29□□□□□ -2.04
RNF223E7ERA6 SNORD53-201ENST00000579969 78 ntBASIC2.29□□□□□ -2.04
RNF223E7ERA6 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.29□□□□□ -2.04
RNF223E7ERA6 MIR7843-201ENST00000622274 79 ntBASIC2.29□□□□□ -2.04
RNF223E7ERA6 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.28□□□□□ -2.04
RNF223E7ERA6 RNU6-364P-201ENST00000384387 107 ntBASIC2.28□□□□□ -2.04
RNF223E7ERA6 RNU1-41P-201ENST00000516161 162 ntBASIC2.28□□□□□ -2.04
RNF223E7ERA6 RNU1-48P-201ENST00000516400 162 ntBASIC2.28□□□□□ -2.04
RNF223E7ERA6 RNU6-1089P-201ENST00000516473 104 ntBASIC2.28□□□□□ -2.04
RNF223E7ERA6 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.28□□□□□ -2.04
RNF223E7ERA6 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
RNF223E7ERA6 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.27□□□□□ -2.05
RNF223E7ERA6 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
RNF223E7ERA6 MIR617-201ENST00000385030 97 ntBASIC2.27□□□□□ -2.05
RNF223E7ERA6 RNU6-656P-201ENST00000516785 107 ntBASIC2.27□□□□□ -2.05
RNF223E7ERA6 AC036111.3-201ENST00000526389 112 ntBASIC2.27□□□□□ -2.05
RNF223E7ERA6 MIR4676-201ENST00000583078 72 ntBASIC2.27□□□□□ -2.05
RNF223E7ERA6 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
RNF223E7ERA6 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
RNF223E7ERA6 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.27□□□□□ -2.05
RNF223E7ERA6 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
RNF223E7ERA6 SNORD60.1-201ENST00000362451 73 ntBASIC2.26□□□□□ -2.05
RNF223E7ERA6 SNORA2.1-201ENST00000363089 137 ntBASIC2.26□□□□□ -2.05
RNF223E7ERA6 RNA5SP403-201ENST00000363598 108 ntBASIC2.26□□□□□ -2.05
RNF223E7ERA6 MIR512-1-201ENST00000384913 84 ntBASIC2.26□□□□□ -2.05
RNF223E7ERA6 RNU4-88P-201ENST00000411220 86 ntBASIC2.26□□□□□ -2.05
RNF223E7ERA6 RPS26P5-201ENST00000418544 335 ntBASIC2.26□□□□□ -2.05
RNF223E7ERA6 snoU13.26-201ENST00000459452 105 ntBASIC2.26□□□□□ -2.05
RNF223E7ERA6 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.26□□□□□ -2.05
RNF223E7ERA6 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.25□□□□□ -2.05
RNF223E7ERA6 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.25□□□□□ -2.05
RNF223E7ERA6 RNU6-54P-201ENST00000365563 107 ntBASIC2.25□□□□□ -2.05
RNF223E7ERA6 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
RNF223E7ERA6 SNORA75.1-201ENST00000391130 148 ntBASIC2.25□□□□□ -2.05
RNF223E7ERA6 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
RNF223E7ERA6 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.24□□□□□ -2.05
RNF223E7ERA6 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
RNF223E7ERA6 Y_RNA.330-201ENST00000365230 109 ntBASIC2.24□□□□□ -2.05
RNF223E7ERA6 RNU1-52P-201ENST00000384190 164 ntBASIC2.24□□□□□ -2.05
RNF223E7ERA6 MIR504-201ENST00000385065 83 ntBASIC2.24□□□□□ -2.05
RNF223E7ERA6 MIR938-201ENST00000401216 83 ntBASIC2.24□□□□□ -2.05
RNF223E7ERA6 AC067940.1-201ENST00000458411 300 ntBASIC2.24□□□□□ -2.05
RNF223E7ERA6 RNU6-237P-201ENST00000515985 71 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms