Protein–RNA interactions for Protein: Q9BQ66

KRTAP4-12, Keratin-associated protein 4-12, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-12Q9BQ66 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC1.13□□□□□ -2.23
KRTAP4-12Q9BQ66 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
KRTAP4-12Q9BQ66 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
KRTAP4-12Q9BQ66 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC1.12□□□□□ -2.23
KRTAP4-12Q9BQ66 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC1.12□□□□□ -2.23
KRTAP4-12Q9BQ66 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC1.12□□□□□ -2.23
KRTAP4-12Q9BQ66 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
KRTAP4-12Q9BQ66 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC1.12□□□□□ -2.23
KRTAP4-12Q9BQ66 Y_RNA.434-201ENST00000384090 100 ntBASIC1.12□□□□□ -2.23
KRTAP4-12Q9BQ66 MIR221-201ENST00000385135 110 ntBASIC1.12□□□□□ -2.23
KRTAP4-12Q9BQ66 RNA5SP339-201ENST00000390987 122 ntBASIC1.12□□□□□ -2.23
KRTAP4-12Q9BQ66 SNORA26.4-201ENST00000391188 123 ntBASIC1.12□□□□□ -2.23
KRTAP4-12Q9BQ66 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
KRTAP4-12Q9BQ66 RNU7-55P-201ENST00000459426 62 ntBASIC1.12□□□□□ -2.23
KRTAP4-12Q9BQ66 RN7SL293P-201ENST00000481765 281 ntBASIC1.12□□□□□ -2.23
KRTAP4-12Q9BQ66 MIR2117-201ENST00000516780 80 ntBASIC1.12□□□□□ -2.23
KRTAP4-12Q9BQ66 RNA5SP143-201ENST00000516936 115 ntBASIC1.12□□□□□ -2.23
KRTAP4-12Q9BQ66 AC008033.2-201ENST00000542626 177 ntBASIC1.12□□□□□ -2.23
KRTAP4-12Q9BQ66 MIR3189-201ENST00000578735 73 ntBASIC1.12□□□□□ -2.23
KRTAP4-12Q9BQ66 SNORA70D-201ENST00000578836 135 ntBASIC1.12□□□□□ -2.23
KRTAP4-12Q9BQ66 MIR4303-201ENST00000581299 66 ntBASIC1.12□□□□□ -2.23
KRTAP4-12Q9BQ66 MIR3939-201ENST00000582614 106 ntBASIC1.12□□□□□ -2.23
KRTAP4-12Q9BQ66 MIR4260-201ENST00000583107 67 ntBASIC1.12□□□□□ -2.23
KRTAP4-12Q9BQ66 MIR4677-201ENST00000584153 80 ntBASIC1.12□□□□□ -2.23
KRTAP4-12Q9BQ66 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC1.12□□□□□ -2.23
KRTAP4-12Q9BQ66 AC012616.1-201ENST00000600294 197 ntBASIC1.12□□□□□ -2.23
KRTAP4-12Q9BQ66 AC131009.3-201ENST00000621809 287 ntBASIC1.12□□□□□ -2.23
KRTAP4-12Q9BQ66 AC120057.5-201ENST00000623840 154 ntBASIC1.12□□□□□ -2.23
KRTAP4-12Q9BQ66 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
KRTAP4-12Q9BQ66 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC1.12□□□□□ -2.23
KRTAP4-12Q9BQ66 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC1.12□□□□□ -2.23
KRTAP4-12Q9BQ66 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC1.12□□□□□ -2.23
KRTAP4-12Q9BQ66 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
KRTAP4-12Q9BQ66 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC1.12□□□□□ -2.23
KRTAP4-12Q9BQ66 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC1.12□□□□□ -2.23
KRTAP4-12Q9BQ66 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
KRTAP4-12Q9BQ66 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
KRTAP4-12Q9BQ66 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC1.11□□□□□ -2.23
KRTAP4-12Q9BQ66 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
KRTAP4-12Q9BQ66 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
KRTAP4-12Q9BQ66 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC1.11□□□□□ -2.23
KRTAP4-12Q9BQ66 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
KRTAP4-12Q9BQ66 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC1.11□□□□□ -2.23
KRTAP4-12Q9BQ66 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
KRTAP4-12Q9BQ66 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
KRTAP4-12Q9BQ66 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
KRTAP4-12Q9BQ66 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
KRTAP4-12Q9BQ66 SNORA62.3-201ENST00000365110 153 ntBASIC1.11□□□□□ -2.23
KRTAP4-12Q9BQ66 MIR106A-201ENST00000384870 81 ntBASIC1.11□□□□□ -2.23
KRTAP4-12Q9BQ66 MIR600-201ENST00000385007 98 ntBASIC1.11□□□□□ -2.23
KRTAP4-12Q9BQ66 SNORA57.1-201ENST00000391227 145 ntBASIC1.11□□□□□ -2.23
KRTAP4-12Q9BQ66 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.11□□□□□ -2.23
KRTAP4-12Q9BQ66 AC079804.2-201ENST00000490376 200 ntBASIC1.11□□□□□ -2.23
KRTAP4-12Q9BQ66 SNORA31.25-201ENST00000517242 134 ntBASIC1.11□□□□□ -2.23
KRTAP4-12Q9BQ66 MIR3160-1-201ENST00000577972 85 ntBASIC1.11□□□□□ -2.23
KRTAP4-12Q9BQ66 MIR3200-201ENST00000580767 85 ntBASIC1.11□□□□□ -2.23
KRTAP4-12Q9BQ66 MIR4691-201ENST00000583764 85 ntBASIC1.11□□□□□ -2.23
KRTAP4-12Q9BQ66 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
KRTAP4-12Q9BQ66 MIR6132-201ENST00000622083 109 ntBASIC1.11□□□□□ -2.23
KRTAP4-12Q9BQ66 UBA3-213ENST00000631029 123 ntTSL 5 BASIC1.11□□□□□ -2.23
KRTAP4-12Q9BQ66 MAPK10-266ENST00000641066 6555 ntBASIC1.11□□□□□ -2.23
KRTAP4-12Q9BQ66 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
KRTAP4-12Q9BQ66 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
KRTAP4-12Q9BQ66 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
KRTAP4-12Q9BQ66 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC1.11□□□□□ -2.23
KRTAP4-12Q9BQ66 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
KRTAP4-12Q9BQ66 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC1.1□□□□□ -2.23
KRTAP4-12Q9BQ66 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC1.1□□□□□ -2.23
KRTAP4-12Q9BQ66 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
KRTAP4-12Q9BQ66 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC1.1□□□□□ -2.23
KRTAP4-12Q9BQ66 GOLGB1-209ENST00000614479 11115 ntAPPRIS ALT2 TSL 1 (best) BASIC1.1□□□□□ -2.23
KRTAP4-12Q9BQ66 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
KRTAP4-12Q9BQ66 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC1.1□□□□□ -2.23
KRTAP4-12Q9BQ66 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
KRTAP4-12Q9BQ66 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.1□□□□□ -2.23
KRTAP4-12Q9BQ66 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC1.1□□□□□ -2.23
KRTAP4-12Q9BQ66 MIR448-201ENST00000362131 111 ntBASIC1.1□□□□□ -2.23
KRTAP4-12Q9BQ66 MIR199B-201ENST00000384849 110 ntBASIC1.1□□□□□ -2.23
KRTAP4-12Q9BQ66 MIR105-1-201ENST00000385222 81 ntBASIC1.1□□□□□ -2.23
KRTAP4-12Q9BQ66 RN7SL447P-201ENST00000494711 245 ntBASIC1.1□□□□□ -2.23
KRTAP4-12Q9BQ66 KRTAP5-14P-201ENST00000502328 121 ntBASIC1.1□□□□□ -2.23
KRTAP4-12Q9BQ66 RNA5SP464-201ENST00000516251 108 ntBASIC1.1□□□□□ -2.23
KRTAP4-12Q9BQ66 SNORA31.9-201ENST00000516429 84 ntBASIC1.1□□□□□ -2.23
KRTAP4-12Q9BQ66 RNA5SP373-201ENST00000517271 95 ntBASIC1.1□□□□□ -2.23
KRTAP4-12Q9BQ66 TBCA-207ENST00000520039 157 ntTSL 3 BASIC1.1□□□□□ -2.23
KRTAP4-12Q9BQ66 MIR5704-201ENST00000584029 77 ntBASIC1.1□□□□□ -2.23
KRTAP4-12Q9BQ66 MIR4715-201ENST00000584117 79 ntBASIC1.1□□□□□ -2.23
KRTAP4-12Q9BQ66 AL391358.1-201ENST00000605342 190 ntBASIC1.1□□□□□ -2.23
KRTAP4-12Q9BQ66 MIR6854-201ENST00000614935 69 ntBASIC1.1□□□□□ -2.23
KRTAP4-12Q9BQ66 Y_RNA.781-201ENST00000620301 103 ntBASIC1.1□□□□□ -2.23
KRTAP4-12Q9BQ66 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC1.1□□□□□ -2.23
KRTAP4-12Q9BQ66 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC1.1□□□□□ -2.23
KRTAP4-12Q9BQ66 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC1.1□□□□□ -2.23
KRTAP4-12Q9BQ66 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC1.1□□□□□ -2.23
KRTAP4-12Q9BQ66 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC1.1□□□□□ -2.23
KRTAP4-12Q9BQ66 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
KRTAP4-12Q9BQ66 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC1.1□□□□□ -2.23
KRTAP4-12Q9BQ66 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
KRTAP4-12Q9BQ66 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
KRTAP4-12Q9BQ66 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 225 ms