Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.5□□□□□ -2.17
KRTAP3-1Q9BYR8 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
KRTAP3-1Q9BYR8 Y_RNA.13-201ENST00000362403 112 ntBASIC1.5□□□□□ -2.17
KRTAP3-1Q9BYR8 RNA5SP276-201ENST00000362580 94 ntBASIC1.5□□□□□ -2.17
KRTAP3-1Q9BYR8 SNORA54-201ENST00000384281 123 ntBASIC1.5□□□□□ -2.17
KRTAP3-1Q9BYR8 MIR524-201ENST00000385242 87 ntBASIC1.5□□□□□ -2.17
KRTAP3-1Q9BYR8 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
KRTAP3-1Q9BYR8 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
KRTAP3-1Q9BYR8 Y_RNA.606-201ENST00000410579 103 ntBASIC1.5□□□□□ -2.17
KRTAP3-1Q9BYR8 RPS29P4-201ENST00000414733 161 ntBASIC1.5□□□□□ -2.17
KRTAP3-1Q9BYR8 RN7SL863P-201ENST00000462370 296 ntBASIC1.5□□□□□ -2.17
KRTAP3-1Q9BYR8 Y_RNA.697-201ENST00000516776 113 ntBASIC1.5□□□□□ -2.17
KRTAP3-1Q9BYR8 EIF4BP1-201ENST00000554881 351 ntBASIC1.5□□□□□ -2.17
KRTAP3-1Q9BYR8 MIR3675-201ENST00000583661 73 ntBASIC1.5□□□□□ -2.17
KRTAP3-1Q9BYR8 AL627230.6-201ENST00000611129 280 ntBASIC1.5□□□□□ -2.17
KRTAP3-1Q9BYR8 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.5□□□□□ -2.17
KRTAP3-1Q9BYR8 MIR8053-201ENST00000613344 75 ntBASIC1.5□□□□□ -2.17
KRTAP3-1Q9BYR8 U6.100-201ENST00000636230 99 ntBASIC1.5□□□□□ -2.17
KRTAP3-1Q9BYR8 ZNF209P-201ENST00000593450 2304 ntBASIC1.5□□□□□ -2.17
KRTAP3-1Q9BYR8 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.5□□□□□ -2.17
KRTAP3-1Q9BYR8 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC1.5□□□□□ -2.17
KRTAP3-1Q9BYR8 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC1.5□□□□□ -2.17
KRTAP3-1Q9BYR8 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
KRTAP3-1Q9BYR8 AC093908.1-201ENST00000623125 8092 ntBASIC1.5□□□□□ -2.17
KRTAP3-1Q9BYR8 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC1.49□□□□□ -2.17
KRTAP3-1Q9BYR8 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
KRTAP3-1Q9BYR8 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC1.49□□□□□ -2.17
KRTAP3-1Q9BYR8 RNA5SP126-201ENST00000365092 109 ntBASIC1.49□□□□□ -2.17
KRTAP3-1Q9BYR8 SNORD88.1-201ENST00000408684 91 ntBASIC1.49□□□□□ -2.17
KRTAP3-1Q9BYR8 AC091153.1-201ENST00000466297 402 ntBASIC1.49□□□□□ -2.17
KRTAP3-1Q9BYR8 AC097510.1-201ENST00000510945 133 ntBASIC1.49□□□□□ -2.17
KRTAP3-1Q9BYR8 SNORA31.11-201ENST00000516528 139 ntBASIC1.49□□□□□ -2.17
KRTAP3-1Q9BYR8 AC138907.6-201ENST00000568401 126 ntBASIC1.49□□□□□ -2.17
KRTAP3-1Q9BYR8 AC138869.1-201ENST00000568623 124 ntBASIC1.49□□□□□ -2.17
KRTAP3-1Q9BYR8 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC1.49□□□□□ -2.17
KRTAP3-1Q9BYR8 AL161756.2-201ENST00000604597 246 ntBASIC1.49□□□□□ -2.17
KRTAP3-1Q9BYR8 MIR8074-201ENST00000615081 81 ntBASIC1.49□□□□□ -2.17
KRTAP3-1Q9BYR8 AC245884.12-201ENST00000615364 59 ntBASIC1.49□□□□□ -2.17
KRTAP3-1Q9BYR8 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.49□□□□□ -2.17
KRTAP3-1Q9BYR8 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
KRTAP3-1Q9BYR8 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
KRTAP3-1Q9BYR8 FTX-214ENST00000638437 12267 ntTSL 5 BASIC1.49□□□□□ -2.17
KRTAP3-1Q9BYR8 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
KRTAP3-1Q9BYR8 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
KRTAP3-1Q9BYR8 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC1.48□□□□□ -2.17
KRTAP3-1Q9BYR8 MIR22-201ENST00000362190 85 ntBASIC1.48□□□□□ -2.17
KRTAP3-1Q9BYR8 SNORA25.4-201ENST00000363666 124 ntBASIC1.48□□□□□ -2.17
KRTAP3-1Q9BYR8 MIR599-201ENST00000385069 95 ntBASIC1.48□□□□□ -2.17
KRTAP3-1Q9BYR8 SNORA57.1-201ENST00000391227 145 ntBASIC1.48□□□□□ -2.17
KRTAP3-1Q9BYR8 SNORD23.1-201ENST00000408212 104 ntBASIC1.48□□□□□ -2.17
KRTAP3-1Q9BYR8 RNU6ATAC-201ENST00000408749 126 ntBASIC1.48□□□□□ -2.17
KRTAP3-1Q9BYR8 RNU6-1054P-201ENST00000411293 104 ntBASIC1.48□□□□□ -2.17
KRTAP3-1Q9BYR8 AC244636.1-201ENST00000421152 228 ntBASIC1.48□□□□□ -2.17
KRTAP3-1Q9BYR8 RN7SL542P-201ENST00000467147 294 ntBASIC1.48□□□□□ -2.17
KRTAP3-1Q9BYR8 RN7SL499P-201ENST00000481141 276 ntBASIC1.48□□□□□ -2.17
KRTAP3-1Q9BYR8 SNORA77B-201ENST00000578179 125 ntBASIC1.48□□□□□ -2.17
KRTAP3-1Q9BYR8 MIR5089-201ENST00000580047 84 ntBASIC1.48□□□□□ -2.17
KRTAP3-1Q9BYR8 MIR3140-201ENST00000583685 90 ntBASIC1.48□□□□□ -2.17
KRTAP3-1Q9BYR8 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC1.48□□□□□ -2.17
KRTAP3-1Q9BYR8 AC005520.4-201ENST00000604337 90 ntBASIC1.48□□□□□ -2.17
KRTAP3-1Q9BYR8 MTRNR2L2-201ENST00000604882 87 ntBASIC1.48□□□□□ -2.17
KRTAP3-1Q9BYR8 U6.81-201ENST00000612550 106 ntBASIC1.48□□□□□ -2.17
KRTAP3-1Q9BYR8 MIR8063-201ENST00000621930 81 ntBASIC1.48□□□□□ -2.17
KRTAP3-1Q9BYR8 MIR6810-201ENST00000622701 70 ntBASIC1.48□□□□□ -2.17
KRTAP3-1Q9BYR8 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
KRTAP3-1Q9BYR8 AL021368.2-201ENST00000606125 5352 ntBASIC1.47□□□□□ -2.17
KRTAP3-1Q9BYR8 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
KRTAP3-1Q9BYR8 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC1.47□□□□□ -2.17
KRTAP3-1Q9BYR8 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
KRTAP3-1Q9BYR8 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.47□□□□□ -2.17
KRTAP3-1Q9BYR8 SNORA24B-201ENST00000384176 131 ntBASIC1.47□□□□□ -2.17
KRTAP3-1Q9BYR8 MIR451A-201ENST00000385059 72 ntBASIC1.47□□□□□ -2.17
KRTAP3-1Q9BYR8 RNU6-630P-201ENST00000391258 106 ntBASIC1.47□□□□□ -2.17
KRTAP3-1Q9BYR8 RNU4-47P-201ENST00000410876 114 ntBASIC1.47□□□□□ -2.17
KRTAP3-1Q9BYR8 RNU6-1057P-201ENST00000517162 102 ntBASIC1.47□□□□□ -2.17
KRTAP3-1Q9BYR8 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC1.47□□□□□ -2.17
KRTAP3-1Q9BYR8 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC1.47□□□□□ -2.17
KRTAP3-1Q9BYR8 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
KRTAP3-1Q9BYR8 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
KRTAP3-1Q9BYR8 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC1.46□□□□□ -2.18
KRTAP3-1Q9BYR8 U8.2-201ENST00000363156 134 ntBASIC1.46□□□□□ -2.18
KRTAP3-1Q9BYR8 Y_RNA.443-201ENST00000384135 111 ntBASIC1.46□□□□□ -2.18
KRTAP3-1Q9BYR8 MIR512-1-201ENST00000384913 84 ntBASIC1.46□□□□□ -2.18
KRTAP3-1Q9BYR8 MIR1193-201ENST00000408109 78 ntBASIC1.46□□□□□ -2.18
KRTAP3-1Q9BYR8 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.46□□□□□ -2.18
KRTAP3-1Q9BYR8 RNU6-881P-201ENST00000516813 102 ntBASIC1.46□□□□□ -2.18
KRTAP3-1Q9BYR8 MIR4713-201ENST00000582691 75 ntBASIC1.46□□□□□ -2.18
KRTAP3-1Q9BYR8 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.45□□□□□ -2.18
KRTAP3-1Q9BYR8 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
KRTAP3-1Q9BYR8 SNORA67.3-201ENST00000384366 140 ntBASIC1.45□□□□□ -2.18
KRTAP3-1Q9BYR8 SNORD45A-201ENST00000384512 84 ntBASIC1.45□□□□□ -2.18
KRTAP3-1Q9BYR8 RNU6-1065P-201ENST00000384513 106 ntBASIC1.45□□□□□ -2.18
KRTAP3-1Q9BYR8 MTND4LP19-201ENST00000403051 166 ntBASIC1.45□□□□□ -2.18
KRTAP3-1Q9BYR8 SNORD83.1-201ENST00000411362 77 ntBASIC1.45□□□□□ -2.18
KRTAP3-1Q9BYR8 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC1.45□□□□□ -2.18
KRTAP3-1Q9BYR8 AC008885.1-201ENST00000514930 301 ntBASIC1.45□□□□□ -2.18
KRTAP3-1Q9BYR8 RNU6-1265P-201ENST00000516342 103 ntBASIC1.45□□□□□ -2.18
KRTAP3-1Q9BYR8 SCARNA13-201ENST00000516672 275 ntBASIC1.45□□□□□ -2.18
KRTAP3-1Q9BYR8 AC107016.2-201ENST00000547968 190 ntBASIC1.45□□□□□ -2.18
KRTAP3-1Q9BYR8 MIR3664-201ENST00000579074 99 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms