Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 RNA5SP282-201ENST00000516355 108 ntBASIC3.1□□□□□ -1.91
NKX2-3Q8TAU0 RNU4ATAC9P-201ENST00000517146 126 ntBASIC3.1□□□□□ -1.91
NKX2-3Q8TAU0 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC3.1□□□□□ -1.91
NKX2-3Q8TAU0 MIR5094-201ENST00000578766 85 ntBASIC3.1□□□□□ -1.91
NKX2-3Q8TAU0 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
NKX2-3Q8TAU0 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
NKX2-3Q8TAU0 RNU6-1254P-201ENST00000391266 104 ntBASIC3.09□□□□□ -1.91
NKX2-3Q8TAU0 RNU4-53P-201ENST00000410828 140 ntBASIC3.09□□□□□ -1.91
NKX2-3Q8TAU0 MIR6733-201ENST00000635723 61 ntBASIC3.09□□□□□ -1.91
NKX2-3Q8TAU0 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.09□□□□□ -1.92
NKX2-3Q8TAU0 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
NKX2-3Q8TAU0 SNORA25.4-201ENST00000363666 124 ntBASIC3.08□□□□□ -1.92
NKX2-3Q8TAU0 U8.9-201ENST00000365667 134 ntBASIC3.08□□□□□ -1.92
NKX2-3Q8TAU0 RNA5SP210-201ENST00000391034 120 ntBASIC3.08□□□□□ -1.92
NKX2-3Q8TAU0 AC027119.1-201ENST00000440877 241 ntBASIC3.08□□□□□ -1.92
NKX2-3Q8TAU0 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.08□□□□□ -1.92
NKX2-3Q8TAU0 AC121758.2-201ENST00000553271 193 ntBASIC3.08□□□□□ -1.92
NKX2-3Q8TAU0 AC021506.2-201ENST00000612354 169 ntBASIC3.08□□□□□ -1.92
NKX2-3Q8TAU0 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
NKX2-3Q8TAU0 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
NKX2-3Q8TAU0 RNU6-243P-201ENST00000391140 107 ntBASIC3.07□□□□□ -1.92
NKX2-3Q8TAU0 RNU6-630P-201ENST00000391258 106 ntBASIC3.07□□□□□ -1.92
NKX2-3Q8TAU0 HMGN2P39-201ENST00000398005 273 ntBASIC3.07□□□□□ -1.92
NKX2-3Q8TAU0 UBBP3-201ENST00000445497 241 ntBASIC3.07□□□□□ -1.92
NKX2-3Q8TAU0 AC011753.1-201ENST00000451001 220 ntBASIC3.07□□□□□ -1.92
NKX2-3Q8TAU0 RNA5SP320-201ENST00000516263 124 ntBASIC3.07□□□□□ -1.92
NKX2-3Q8TAU0 MIR4764-201ENST00000580680 88 ntBASIC3.07□□□□□ -1.92
NKX2-3Q8TAU0 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.07□□□□□ -1.92
NKX2-3Q8TAU0 AL161431.1-201ENST00000618966 4205 ntBASIC3.07□□□□□ -1.92
NKX2-3Q8TAU0 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
NKX2-3Q8TAU0 MIR518E-201ENST00000385252 88 ntBASIC3.06□□□□□ -1.92
NKX2-3Q8TAU0 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
NKX2-3Q8TAU0 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
NKX2-3Q8TAU0 SNORA9.3-201ENST00000516383 129 ntBASIC3.06□□□□□ -1.92
NKX2-3Q8TAU0 MIR548AO-201ENST00000579992 96 ntBASIC3.06□□□□□ -1.92
NKX2-3Q8TAU0 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.06□□□□□ -1.92
NKX2-3Q8TAU0 RNU6-466P-201ENST00000391224 103 ntBASIC3.05□□□□□ -1.92
NKX2-3Q8TAU0 RNU6-56P-201ENST00000516986 93 ntBASIC3.05□□□□□ -1.92
NKX2-3Q8TAU0 SNORA31.26-201ENST00000517250 137 ntBASIC3.05□□□□□ -1.92
NKX2-3Q8TAU0 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.05□□□□□ -1.92
NKX2-3Q8TAU0 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NKX2-3Q8TAU0 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
NKX2-3Q8TAU0 SNORD56.5-201ENST00000364281 72 ntBASIC3.04□□□□□ -1.92
NKX2-3Q8TAU0 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
NKX2-3Q8TAU0 BX276092.1-201ENST00000427368 251 ntBASIC3.04□□□□□ -1.92
NKX2-3Q8TAU0 AL356320.1-201ENST00000429616 163 ntBASIC3.04□□□□□ -1.92
NKX2-3Q8TAU0 RNA5SP137-201ENST00000516833 135 ntBASIC3.04□□□□□ -1.92
NKX2-3Q8TAU0 AC103706.3-201ENST00000636297 85 ntBASIC3.04□□□□□ -1.92
NKX2-3Q8TAU0 Y_RNA.42-201ENST00000362660 108 ntBASIC3.03□□□□□ -1.92
NKX2-3Q8TAU0 Y_RNA.119-201ENST00000363301 96 ntBASIC3.03□□□□□ -1.92
NKX2-3Q8TAU0 RNU6-669P-201ENST00000365575 107 ntBASIC3.03□□□□□ -1.92
NKX2-3Q8TAU0 RNU6-154P-201ENST00000384306 106 ntBASIC3.03□□□□□ -1.92
NKX2-3Q8TAU0 MIR516A2-201ENST00000384888 90 ntBASIC3.03□□□□□ -1.92
NKX2-3Q8TAU0 MIR516A1-201ENST00000385033 90 ntBASIC3.03□□□□□ -1.92
NKX2-3Q8TAU0 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.03□□□□□ -1.92
NKX2-3Q8TAU0 MIR764-201ENST00000390811 85 ntBASIC3.03□□□□□ -1.92
NKX2-3Q8TAU0 AC019129.1-201ENST00000403786 261 ntBASIC3.03□□□□□ -1.92
NKX2-3Q8TAU0 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.02□□□□□ -1.93
NKX2-3Q8TAU0 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.02□□□□□ -1.93
NKX2-3Q8TAU0 MIR424-201ENST00000362227 98 ntBASIC3.02□□□□□ -1.93
NKX2-3Q8TAU0 Y_RNA.443-201ENST00000384135 111 ntBASIC3.02□□□□□ -1.93
NKX2-3Q8TAU0 RNU6-614P-201ENST00000384369 107 ntBASIC3.02□□□□□ -1.93
NKX2-3Q8TAU0 MIR520A-201ENST00000384862 85 ntBASIC3.02□□□□□ -1.93
NKX2-3Q8TAU0 MIR1289-2-201ENST00000408360 111 ntBASIC3.02□□□□□ -1.93
NKX2-3Q8TAU0 AC245517.4-201ENST00000448601 281 ntBASIC3.02□□□□□ -1.93
NKX2-3Q8TAU0 RNU7-26P-201ENST00000458980 63 ntBASIC3.02□□□□□ -1.93
NKX2-3Q8TAU0 MIR3126-201ENST00000577443 74 ntBASIC3.02□□□□□ -1.93
NKX2-3Q8TAU0 MIR3935-201ENST00000583472 104 ntBASIC3.02□□□□□ -1.93
NKX2-3Q8TAU0 U6.59-201ENST00000615686 107 ntBASIC3.02□□□□□ -1.93
NKX2-3Q8TAU0 RNU6-330P-201ENST00000363015 107 ntBASIC3.01□□□□□ -1.93
NKX2-3Q8TAU0 RNU6-340P-201ENST00000364005 107 ntBASIC3.01□□□□□ -1.93
NKX2-3Q8TAU0 RNU1-148P-201ENST00000384472 162 ntBASIC3.01□□□□□ -1.93
NKX2-3Q8TAU0 RNU6-291P-201ENST00000384720 107 ntBASIC3.01□□□□□ -1.93
NKX2-3Q8TAU0 MIR520C-201ENST00000385005 87 ntBASIC3.01□□□□□ -1.93
NKX2-3Q8TAU0 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
NKX2-3Q8TAU0 RN7SKP223-201ENST00000410582 62 ntBASIC3.01□□□□□ -1.93
NKX2-3Q8TAU0 snoU13.17-201ENST00000458802 104 ntBASIC3.01□□□□□ -1.93
NKX2-3Q8TAU0 snoU13.2-201ENST00000459201 104 ntBASIC3.01□□□□□ -1.93
NKX2-3Q8TAU0 RNA5SP458-201ENST00000516188 119 ntBASIC3.01□□□□□ -1.93
NKX2-3Q8TAU0 MIR4709-201ENST00000577272 72 ntBASIC3.01□□□□□ -1.93
NKX2-3Q8TAU0 MIR4511-201ENST00000582784 87 ntBASIC3.01□□□□□ -1.93
NKX2-3Q8TAU0 U4.3-201ENST00000621047 82 ntBASIC3.01□□□□□ -1.93
NKX2-3Q8TAU0 U6.109-201ENST00000636749 87 ntBASIC3.01□□□□□ -1.93
NKX2-3Q8TAU0 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
NKX2-3Q8TAU0 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC3□□□□□ -1.93
NKX2-3Q8TAU0 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
NKX2-3Q8TAU0 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
NKX2-3Q8TAU0 MIRLET7F1-201ENST00000362202 87 ntBASIC3□□□□□ -1.93
NKX2-3Q8TAU0 RNA5SP289-201ENST00000362332 137 ntBASIC3□□□□□ -1.93
NKX2-3Q8TAU0 SNORD115-3-201ENST00000363100 82 ntBASIC3□□□□□ -1.93
NKX2-3Q8TAU0 RNU6ATAC42P-201ENST00000408637 95 ntBASIC3□□□□□ -1.93
NKX2-3Q8TAU0 SNORD88.1-201ENST00000408684 91 ntBASIC3□□□□□ -1.93
NKX2-3Q8TAU0 RNA5SP492-201ENST00000411330 114 ntBASIC3□□□□□ -1.93
NKX2-3Q8TAU0 AC099513.1-201ENST00000490423 301 ntBASIC3□□□□□ -1.93
NKX2-3Q8TAU0 MIR4251-201ENST00000635819 61 ntBASIC3□□□□□ -1.93
NKX2-3Q8TAU0 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
NKX2-3Q8TAU0 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
NKX2-3Q8TAU0 RNU6-681P-201ENST00000364012 104 ntBASIC2.99□□□□□ -1.93
NKX2-3Q8TAU0 RNU6-895P-201ENST00000384125 103 ntBASIC2.99□□□□□ -1.93
NKX2-3Q8TAU0 SNORD90-201ENST00000391145 111 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 211.1 ms