Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 MIR27B-201ENST00000385129 97 ntBASIC2.73□□□□□ -1.97
PTCRAQ6ISU1 RNU6-1254P-201ENST00000391266 104 ntBASIC2.73□□□□□ -1.97
PTCRAQ6ISU1 UBBP3-201ENST00000445497 241 ntBASIC2.73□□□□□ -1.97
PTCRAQ6ISU1 AC023790.1-201ENST00000482174 347 ntBASIC2.73□□□□□ -1.97
PTCRAQ6ISU1 U6.109-201ENST00000636749 87 ntBASIC2.73□□□□□ -1.97
PTCRAQ6ISU1 AC131280.1-202ENST00000624067 4211 ntBASIC2.73□□□□□ -1.97
PTCRAQ6ISU1 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
PTCRAQ6ISU1 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
PTCRAQ6ISU1 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
PTCRAQ6ISU1 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
PTCRAQ6ISU1 MIR26A1-201ENST00000362205 77 ntBASIC2.72□□□□□ -1.97
PTCRAQ6ISU1 SNORD114-1-201ENST00000362705 72 ntBASIC2.72□□□□□ -1.97
PTCRAQ6ISU1 Y_RNA.164-201ENST00000363709 102 ntBASIC2.72□□□□□ -1.97
PTCRAQ6ISU1 RNU6-396P-201ENST00000365369 105 ntBASIC2.72□□□□□ -1.97
PTCRAQ6ISU1 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
PTCRAQ6ISU1 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.72□□□□□ -1.97
PTCRAQ6ISU1 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.97
PTCRAQ6ISU1 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.71□□□□□ -1.98
PTCRAQ6ISU1 SNORD36A-201ENST00000362874 73 ntBASIC2.71□□□□□ -1.98
PTCRAQ6ISU1 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
PTCRAQ6ISU1 RNU6-243P-201ENST00000391140 107 ntBASIC2.71□□□□□ -1.98
PTCRAQ6ISU1 HSPE1P24-201ENST00000450782 238 ntBASIC2.71□□□□□ -1.98
PTCRAQ6ISU1 AC125388.1-201ENST00000459631 156 ntBASIC2.71□□□□□ -1.98
PTCRAQ6ISU1 RNA5SP385-201ENST00000515947 110 ntBASIC2.71□□□□□ -1.98
PTCRAQ6ISU1 SNORA18.5-201ENST00000516616 101 ntBASIC2.71□□□□□ -1.98
PTCRAQ6ISU1 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
PTCRAQ6ISU1 RNU6-203P-201ENST00000384038 104 ntBASIC2.7□□□□□ -1.98
PTCRAQ6ISU1 MIR548U-201ENST00000390728 81 ntBASIC2.7□□□□□ -1.98
PTCRAQ6ISU1 RNA5SP270-201ENST00000411361 118 ntBASIC2.7□□□□□ -1.98
PTCRAQ6ISU1 BX276092.1-201ENST00000427368 251 ntBASIC2.7□□□□□ -1.98
PTCRAQ6ISU1 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
PTCRAQ6ISU1 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.7□□□□□ -1.98
PTCRAQ6ISU1 RNA5SP445-201ENST00000515889 115 ntBASIC2.7□□□□□ -1.98
PTCRAQ6ISU1 Y_RNA.681-201ENST00000516445 113 ntBASIC2.7□□□□□ -1.98
PTCRAQ6ISU1 SNORA31.17-201ENST00000516953 127 ntBASIC2.7□□□□□ -1.98
PTCRAQ6ISU1 RNU6-448P-201ENST00000517052 107 ntBASIC2.7□□□□□ -1.98
PTCRAQ6ISU1 MIR1273D-201ENST00000577266 86 ntBASIC2.7□□□□□ -1.98
PTCRAQ6ISU1 Y_RNA.338-201ENST00000365320 114 ntBASIC2.69□□□□□ -1.98
PTCRAQ6ISU1 SNORD77.2-201ENST00000391045 68 ntBASIC2.69□□□□□ -1.98
PTCRAQ6ISU1 UQCRHP3-201ENST00000451503 251 ntBASIC2.69□□□□□ -1.98
PTCRAQ6ISU1 RNU6-1108P-201ENST00000516308 104 ntBASIC2.69□□□□□ -1.98
PTCRAQ6ISU1 MIR4264-201ENST00000583520 66 ntBASIC2.69□□□□□ -1.98
PTCRAQ6ISU1 SNORD92-201ENST00000585078 85 ntBASIC2.69□□□□□ -1.98
PTCRAQ6ISU1 AC067747.1-201ENST00000608026 250 ntBASIC2.69□□□□□ -1.98
PTCRAQ6ISU1 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
PTCRAQ6ISU1 SNORD56.5-201ENST00000364281 72 ntBASIC2.68□□□□□ -1.98
PTCRAQ6ISU1 RNA5SP292-201ENST00000390974 118 ntBASIC2.68□□□□□ -1.98
PTCRAQ6ISU1 RNA5SP344-201ENST00000411081 104 ntBASIC2.68□□□□□ -1.98
PTCRAQ6ISU1 SNORD111.1-201ENST00000516421 86 ntBASIC2.68□□□□□ -1.98
PTCRAQ6ISU1 AC104996.3-201ENST00000590718 94 ntBASIC2.68□□□□□ -1.98
PTCRAQ6ISU1 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
PTCRAQ6ISU1 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
PTCRAQ6ISU1 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.67□□□□□ -1.98
PTCRAQ6ISU1 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
PTCRAQ6ISU1 MIR30D-201ENST00000362283 70 ntBASIC2.67□□□□□ -1.98
PTCRAQ6ISU1 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.67□□□□□ -1.98
PTCRAQ6ISU1 RNU6-1015P-201ENST00000517121 99 ntBASIC2.67□□□□□ -1.98
PTCRAQ6ISU1 SNORA31.26-201ENST00000517250 137 ntBASIC2.67□□□□□ -1.98
PTCRAQ6ISU1 MIR3064-201ENST00000581130 66 ntBASIC2.67□□□□□ -1.98
PTCRAQ6ISU1 MIR4506-201ENST00000584693 77 ntBASIC2.67□□□□□ -1.98
PTCRAQ6ISU1 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
PTCRAQ6ISU1 RNU5F-1-201ENST00000362507 117 ntBASIC2.66□□□□□ -1.98
PTCRAQ6ISU1 Y_RNA.283-201ENST00000364798 112 ntBASIC2.66□□□□□ -1.98
PTCRAQ6ISU1 MIR516A2-201ENST00000384888 90 ntBASIC2.66□□□□□ -1.98
PTCRAQ6ISU1 MIR516A1-201ENST00000385033 90 ntBASIC2.66□□□□□ -1.98
PTCRAQ6ISU1 MT-TN-201ENST00000387400 73 ntBASIC2.66□□□□□ -1.98
PTCRAQ6ISU1 RN7SKP123-201ENST00000410732 291 ntBASIC2.66□□□□□ -1.98
PTCRAQ6ISU1 AC245517.4-201ENST00000448601 281 ntBASIC2.66□□□□□ -1.98
PTCRAQ6ISU1 AC005908.1-201ENST00000468701 347 ntBASIC2.66□□□□□ -1.98
PTCRAQ6ISU1 RNU6-70P-201ENST00000516438 60 ntBASIC2.66□□□□□ -1.98
PTCRAQ6ISU1 MIR4635-201ENST00000583759 79 ntBASIC2.66□□□□□ -1.98
PTCRAQ6ISU1 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
PTCRAQ6ISU1 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
PTCRAQ6ISU1 Y_RNA.491-201ENST00000384417 107 ntBASIC2.65□□□□□ -1.99
PTCRAQ6ISU1 MIR520H-201ENST00000385126 88 ntBASIC2.65□□□□□ -1.99
PTCRAQ6ISU1 MT-TF-201ENST00000387314 71 ntBASIC2.65□□□□□ -1.99
PTCRAQ6ISU1 RNU6-466P-201ENST00000391224 103 ntBASIC2.65□□□□□ -1.99
PTCRAQ6ISU1 RNU6-1165P-201ENST00000410119 107 ntBASIC2.65□□□□□ -1.99
PTCRAQ6ISU1 HMGN2P23-201ENST00000456759 269 ntBASIC2.65□□□□□ -1.99
PTCRAQ6ISU1 RNU6-75P-201ENST00000515944 104 ntBASIC2.65□□□□□ -1.99
PTCRAQ6ISU1 RNU6-303P-201ENST00000517091 106 ntBASIC2.65□□□□□ -1.99
PTCRAQ6ISU1 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.65□□□□□ -1.99
PTCRAQ6ISU1 MIR4658-201ENST00000584344 65 ntBASIC2.65□□□□□ -1.99
PTCRAQ6ISU1 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.65□□□□□ -1.99
PTCRAQ6ISU1 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
PTCRAQ6ISU1 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
PTCRAQ6ISU1 RNA5SP450-201ENST00000411206 102 ntBASIC2.64□□□□□ -1.99
PTCRAQ6ISU1 AC015818.7-201ENST00000428754 109 ntBASIC2.64□□□□□ -1.99
PTCRAQ6ISU1 RNU6-634P-201ENST00000459134 106 ntBASIC2.64□□□□□ -1.99
PTCRAQ6ISU1 RNU6-56P-201ENST00000516986 93 ntBASIC2.64□□□□□ -1.99
PTCRAQ6ISU1 MIR4529-201ENST00000578110 78 ntBASIC2.64□□□□□ -1.99
PTCRAQ6ISU1 AP000942.3-201ENST00000603702 160 ntBASIC2.64□□□□□ -1.99
PTCRAQ6ISU1 MIR6740-201ENST00000618268 113 ntBASIC2.64□□□□□ -1.99
PTCRAQ6ISU1 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
PTCRAQ6ISU1 Y_RNA.226-201ENST00000364337 114 ntBASIC2.63□□□□□ -1.99
PTCRAQ6ISU1 U8.9-201ENST00000365667 134 ntBASIC2.63□□□□□ -1.99
PTCRAQ6ISU1 AL161935.2-201ENST00000414627 60 ntBASIC2.63□□□□□ -1.99
PTCRAQ6ISU1 RNU6-687P-201ENST00000516443 89 ntBASIC2.63□□□□□ -1.99
PTCRAQ6ISU1 MIR2115-201ENST00000516657 100 ntBASIC2.63□□□□□ -1.99
PTCRAQ6ISU1 RNU4ATAC9P-201ENST00000517146 126 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms