Protein–RNA interactions for Protein: Q5VXU3

CHIC1, Cysteine-rich hydrophobic domain-containing protein 1, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHIC1Q5VXU3 SNORA70.24-201ENST00000517233 118 ntBASIC6.01□□□□□ -1.45
CHIC1Q5VXU3 AC026403.1-201ENST00000518938 295 ntBASIC6.01□□□□□ -1.45
CHIC1Q5VXU3 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC6.01□□□□□ -1.45
CHIC1Q5VXU3 RNA5SP264-201ENST00000363115 107 ntBASIC6□□□□□ -1.45
CHIC1Q5VXU3 MIR2114-201ENST00000516645 80 ntBASIC6□□□□□ -1.45
CHIC1Q5VXU3 GS1-279B7.1-204ENST00000641809 378 ntBASIC6□□□□□ -1.45
CHIC1Q5VXU3 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CHIC1Q5VXU3 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC6□□□□□ -1.45
CHIC1Q5VXU3 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC6□□□□□ -1.45
CHIC1Q5VXU3 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CHIC1Q5VXU3 RNA5SP119-201ENST00000362715 117 ntBASIC5.99□□□□□ -1.45
CHIC1Q5VXU3 MIR521-2-201ENST00000384818 87 ntBASIC5.99□□□□□ -1.45
CHIC1Q5VXU3 RNU6ATAC6P-201ENST00000408132 126 ntBASIC5.99□□□□□ -1.45
CHIC1Q5VXU3 AC018659.1-201ENST00000551083 169 ntBASIC5.99□□□□□ -1.45
CHIC1Q5VXU3 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CHIC1Q5VXU3 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC5.99□□□□□ -1.45
CHIC1Q5VXU3 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CHIC1Q5VXU3 AC244505.6-201ENST00000452829 130 ntBASIC5.98□□□□□ -1.45
CHIC1Q5VXU3 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
CHIC1Q5VXU3 SNORA9-201ENST00000384215 133 ntBASIC5.97□□□□□ -1.45
CHIC1Q5VXU3 AC006989.1-201ENST00000427212 131 ntBASIC5.97□□□□□ -1.45
CHIC1Q5VXU3 AL513328.1-201ENST00000446460 224 ntBASIC5.97□□□□□ -1.45
CHIC1Q5VXU3 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC5.97□□□□□ -1.45
CHIC1Q5VXU3 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC5.97□□□□□ -1.45
CHIC1Q5VXU3 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
CHIC1Q5VXU3 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
CHIC1Q5VXU3 SNORA74D-201ENST00000516404 141 ntBASIC5.96□□□□□ -1.46
CHIC1Q5VXU3 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC5.96□□□□□ -1.46
CHIC1Q5VXU3 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
CHIC1Q5VXU3 CPD-202ENST00000543464 4007 ntTSL 2 BASIC5.95□□□□□ -1.46
CHIC1Q5VXU3 RNU6-986P-201ENST00000363133 102 ntBASIC5.95□□□□□ -1.46
CHIC1Q5VXU3 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CHIC1Q5VXU3 AC008608.1-201ENST00000603910 127 ntBASIC5.95□□□□□ -1.46
CHIC1Q5VXU3 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CHIC1Q5VXU3 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CHIC1Q5VXU3 Y_RNA.250-201ENST00000364542 110 ntBASIC5.94□□□□□ -1.46
CHIC1Q5VXU3 MIR125B2-201ENST00000385128 89 ntBASIC5.94□□□□□ -1.46
CHIC1Q5VXU3 RNU6-696P-201ENST00000390834 107 ntBASIC5.94□□□□□ -1.46
CHIC1Q5VXU3 MIR7110-201ENST00000612638 86 ntBASIC5.94□□□□□ -1.46
CHIC1Q5VXU3 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC5.94□□□□□ -1.46
CHIC1Q5VXU3 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
CHIC1Q5VXU3 RNA5SP383-201ENST00000362934 120 ntBASIC5.93□□□□□ -1.46
CHIC1Q5VXU3 RNU6V-201ENST00000384105 107 ntBASIC5.93□□□□□ -1.46
CHIC1Q5VXU3 SNORD17-201ENST00000390930 237 ntBASIC5.93□□□□□ -1.46
CHIC1Q5VXU3 SNORD83.1-201ENST00000411362 77 ntBASIC5.93□□□□□ -1.46
CHIC1Q5VXU3 AC067940.1-201ENST00000458411 300 ntBASIC5.93□□□□□ -1.46
CHIC1Q5VXU3 SNORD105B-201ENST00000458770 79 ntBASIC5.93□□□□□ -1.46
CHIC1Q5VXU3 5S_rRNA.12-201ENST00000617631 107 ntBASIC5.93□□□□□ -1.46
CHIC1Q5VXU3 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
CHIC1Q5VXU3 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CHIC1Q5VXU3 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC5.92□□□□□ -1.46
CHIC1Q5VXU3 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CHIC1Q5VXU3 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC5.92□□□□□ -1.46
CHIC1Q5VXU3 AL161935.2-201ENST00000414627 60 ntBASIC5.92□□□□□ -1.46
CHIC1Q5VXU3 AC027290.2-201ENST00000623210 18662 ntBASIC5.92□□□□□ -1.46
CHIC1Q5VXU3 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
CHIC1Q5VXU3 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CHIC1Q5VXU3 snoU13.21-201ENST00000459368 105 ntBASIC5.91□□□□□ -1.46
CHIC1Q5VXU3 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CHIC1Q5VXU3 RPS29P4-201ENST00000414733 161 ntBASIC5.9□□□□□ -1.46
CHIC1Q5VXU3 AC025518.1-201ENST00000479856 347 ntBASIC5.9□□□□□ -1.46
CHIC1Q5VXU3 MIR2276-201ENST00000516886 89 ntBASIC5.9□□□□□ -1.46
CHIC1Q5VXU3 RNU6-250P-201ENST00000516958 103 ntBASIC5.9□□□□□ -1.46
CHIC1Q5VXU3 AP003355.3-201ENST00000623465 114 ntBASIC5.9□□□□□ -1.46
CHIC1Q5VXU3 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CHIC1Q5VXU3 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CHIC1Q5VXU3 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
CHIC1Q5VXU3 RNU4-35P-201ENST00000362588 141 ntBASIC5.89□□□□□ -1.47
CHIC1Q5VXU3 MIR490-201ENST00000384865 128 ntBASIC5.89□□□□□ -1.47
CHIC1Q5VXU3 MIR617-201ENST00000385030 97 ntBASIC5.89□□□□□ -1.47
CHIC1Q5VXU3 AC098934.3-201ENST00000430450 190 ntBASIC5.89□□□□□ -1.47
CHIC1Q5VXU3 AL645939.4-201ENST00000604495 135 ntBASIC5.89□□□□□ -1.47
CHIC1Q5VXU3 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CHIC1Q5VXU3 U8.2-201ENST00000363156 134 ntBASIC5.88□□□□□ -1.47
CHIC1Q5VXU3 RNA5SP126-201ENST00000365092 109 ntBASIC5.88□□□□□ -1.47
CHIC1Q5VXU3 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC5.88□□□□□ -1.47
CHIC1Q5VXU3 USP33-201ENST00000357428 4155 ntTSL 5 BASIC5.88□□□□□ -1.47
CHIC1Q5VXU3 RNU6-934P-201ENST00000365154 107 ntBASIC5.87□□□□□ -1.47
CHIC1Q5VXU3 MIR34B-201ENST00000385076 84 ntBASIC5.87□□□□□ -1.47
CHIC1Q5VXU3 SNORA40B-201ENST00000385573 128 ntBASIC5.87□□□□□ -1.47
CHIC1Q5VXU3 RN7SL442P-201ENST00000473804 320 ntBASIC5.87□□□□□ -1.47
CHIC1Q5VXU3 IGKV2-26-201ENST00000518305 343 ntBASIC5.87□□□□□ -1.47
CHIC1Q5VXU3 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CHIC1Q5VXU3 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CHIC1Q5VXU3 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CHIC1Q5VXU3 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC5.85□□□□□ -1.47
CHIC1Q5VXU3 Y_RNA.325-201ENST00000365171 122 ntBASIC5.85□□□□□ -1.47
CHIC1Q5VXU3 JTBP1-201ENST00000441314 247 ntBASIC5.85□□□□□ -1.47
CHIC1Q5VXU3 RNU2-27P-201ENST00000516185 142 ntBASIC5.85□□□□□ -1.47
CHIC1Q5VXU3 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC5.85□□□□□ -1.47
CHIC1Q5VXU3 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC5.85□□□□□ -1.47
CHIC1Q5VXU3 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CHIC1Q5VXU3 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC5.85□□□□□ -1.47
CHIC1Q5VXU3 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CHIC1Q5VXU3 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CHIC1Q5VXU3 RNA5SP270-201ENST00000411361 118 ntBASIC5.84□□□□□ -1.47
CHIC1Q5VXU3 snoU13.13-201ENST00000458842 104 ntBASIC5.84□□□□□ -1.47
CHIC1Q5VXU3 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
CHIC1Q5VXU3 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
CHIC1Q5VXU3 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 220.2 ms