Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 RPL23AP42-201ENST00000471152 471 ntBASIC2.91□□□□□ -1.94
GFRA3O60609 SNORA9.3-201ENST00000516383 129 ntBASIC2.91□□□□□ -1.94
GFRA3O60609 AC073869.9-201ENST00000641610 120 ntBASIC2.91□□□□□ -1.94
GFRA3O60609 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
GFRA3O60609 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
GFRA3O60609 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
GFRA3O60609 RNU6-1260P-201ENST00000362944 107 ntBASIC2.9□□□□□ -1.95
GFRA3O60609 RNA5SP425-201ENST00000410336 112 ntBASIC2.9□□□□□ -1.95
GFRA3O60609 RNU6-935P-201ENST00000410371 100 ntBASIC2.9□□□□□ -1.95
GFRA3O60609 HMGN2P3-201ENST00000433603 273 ntBASIC2.9□□□□□ -1.95
GFRA3O60609 HMGN2P5-201ENST00000436882 273 ntBASIC2.9□□□□□ -1.95
GFRA3O60609 AC019176.1-201ENST00000518519 225 ntBASIC2.9□□□□□ -1.95
GFRA3O60609 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
GFRA3O60609 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
GFRA3O60609 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
GFRA3O60609 RNU6-23P-201ENST00000363283 107 ntBASIC2.89□□□□□ -1.95
GFRA3O60609 MIR512-1-201ENST00000384913 84 ntBASIC2.89□□□□□ -1.95
GFRA3O60609 MIR3935-201ENST00000583472 104 ntBASIC2.89□□□□□ -1.95
GFRA3O60609 AC012531.5-201ENST00000611375 151 ntBASIC2.89□□□□□ -1.95
GFRA3O60609 MIR4251-201ENST00000635819 61 ntBASIC2.89□□□□□ -1.95
GFRA3O60609 RNU6-645P-201ENST00000364649 106 ntBASIC2.88□□□□□ -1.95
GFRA3O60609 RNU1-109P-201ENST00000383960 147 ntBASIC2.88□□□□□ -1.95
GFRA3O60609 Y_RNA.536-201ENST00000384621 113 ntBASIC2.88□□□□□ -1.95
GFRA3O60609 SNORD100-201ENST00000408573 76 ntBASIC2.88□□□□□ -1.95
GFRA3O60609 Y_RNA.809-201ENST00000516058 95 ntBASIC2.88□□□□□ -1.95
GFRA3O60609 SNORA25.16-201ENST00000516741 121 ntBASIC2.88□□□□□ -1.95
GFRA3O60609 MIR6740-201ENST00000618268 113 ntBASIC2.88□□□□□ -1.95
GFRA3O60609 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
GFRA3O60609 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
GFRA3O60609 RNA5SP215-201ENST00000363440 122 ntBASIC2.87□□□□□ -1.95
GFRA3O60609 MIR520C-201ENST00000385005 87 ntBASIC2.87□□□□□ -1.95
GFRA3O60609 Y_RNA.697-201ENST00000516776 113 ntBASIC2.87□□□□□ -1.95
GFRA3O60609 PRELID3BP2-201ENST00000605362 201 ntBASIC2.87□□□□□ -1.95
GFRA3O60609 AC021506.2-201ENST00000612354 169 ntBASIC2.87□□□□□ -1.95
GFRA3O60609 AL513423.1-201ENST00000621695 132 ntBASIC2.87□□□□□ -1.95
GFRA3O60609 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
GFRA3O60609 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
GFRA3O60609 AC108206.1-201ENST00000570186 4159 ntBASIC2.87□□□□□ -1.95
GFRA3O60609 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
GFRA3O60609 SNORD6-201ENST00000365444 73 ntBASIC2.86□□□□□ -1.95
GFRA3O60609 Y_RNA.355-201ENST00000365462 98 ntBASIC2.86□□□□□ -1.95
GFRA3O60609 RNU6-520P-201ENST00000384717 104 ntBASIC2.86□□□□□ -1.95
GFRA3O60609 MIR9-1-201ENST00000385198 89 ntBASIC2.86□□□□□ -1.95
GFRA3O60609 AC104389.3-201ENST00000445629 235 ntBASIC2.86□□□□□ -1.95
GFRA3O60609 MIR4491-201ENST00000581087 68 ntBASIC2.86□□□□□ -1.95
GFRA3O60609 AC005786.1-201ENST00000588553 154 ntBASIC2.86□□□□□ -1.95
GFRA3O60609 IGKV1OR2-6-201ENST00000603485 277 ntBASIC2.86□□□□□ -1.95
GFRA3O60609 AC110079.1-202ENST00000635213 138 ntBASIC2.86□□□□□ -1.95
GFRA3O60609 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.86□□□□□ -1.95
GFRA3O60609 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
GFRA3O60609 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.86□□□□□ -1.95
GFRA3O60609 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
GFRA3O60609 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.86□□□□□ -1.95
GFRA3O60609 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
GFRA3O60609 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
GFRA3O60609 MIR30E-201ENST00000362104 92 ntBASIC2.85□□□□□ -1.95
GFRA3O60609 RNU4-58P-201ENST00000363192 141 ntBASIC2.85□□□□□ -1.95
GFRA3O60609 AL159169.1-201ENST00000421119 127 ntBASIC2.85□□□□□ -1.95
GFRA3O60609 AC009474.2-201ENST00000451383 136 ntBASIC2.85□□□□□ -1.95
GFRA3O60609 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC2.85□□□□□ -1.95
GFRA3O60609 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC2.84□□□□□ -1.95
GFRA3O60609 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
GFRA3O60609 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.84□□□□□ -1.95
GFRA3O60609 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.84□□□□□ -1.95
GFRA3O60609 MIR545-201ENST00000385085 106 ntBASIC2.84□□□□□ -1.95
GFRA3O60609 SUMO2P12-201ENST00000405924 140 ntBASIC2.84□□□□□ -1.95
GFRA3O60609 AC099513.1-201ENST00000490423 301 ntBASIC2.84□□□□□ -1.95
GFRA3O60609 RNU7-41P-201ENST00000515917 61 ntBASIC2.84□□□□□ -1.95
GFRA3O60609 RNU6-902P-201ENST00000517212 91 ntBASIC2.84□□□□□ -1.95
GFRA3O60609 MIR5094-201ENST00000578766 85 ntBASIC2.84□□□□□ -1.95
GFRA3O60609 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.96
GFRA3O60609 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
GFRA3O60609 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
GFRA3O60609 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
GFRA3O60609 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
GFRA3O60609 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
GFRA3O60609 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
GFRA3O60609 RNU4-33P-201ENST00000364316 85 ntBASIC2.83□□□□□ -1.96
GFRA3O60609 SNORA9.2-201ENST00000365361 133 ntBASIC2.83□□□□□ -1.96
GFRA3O60609 RNU6-1039P-201ENST00000383931 107 ntBASIC2.83□□□□□ -1.96
GFRA3O60609 Y_RNA.588-201ENST00000391254 102 ntBASIC2.83□□□□□ -1.96
GFRA3O60609 RNU2-37P-201ENST00000410695 177 ntBASIC2.83□□□□□ -1.96
GFRA3O60609 RNU4-53P-201ENST00000410828 140 ntBASIC2.83□□□□□ -1.96
GFRA3O60609 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC2.83□□□□□ -1.96
GFRA3O60609 RNU6-1053P-201ENST00000515930 101 ntBASIC2.83□□□□□ -1.96
GFRA3O60609 RNU6ATAC14P-201ENST00000516218 91 ntBASIC2.83□□□□□ -1.96
GFRA3O60609 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC2.83□□□□□ -1.96
GFRA3O60609 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
GFRA3O60609 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
GFRA3O60609 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.83□□□□□ -1.96
GFRA3O60609 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
GFRA3O60609 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
GFRA3O60609 U3.27-201ENST00000391237 200 ntBASIC2.82□□□□□ -1.96
GFRA3O60609 AC023141.11-201ENST00000508864 202 ntBASIC2.82□□□□□ -1.96
GFRA3O60609 RNA5SP137-201ENST00000516833 135 ntBASIC2.82□□□□□ -1.96
GFRA3O60609 SUB1P4-201ENST00000566062 339 ntBASIC2.82□□□□□ -1.96
GFRA3O60609 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
GFRA3O60609 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
GFRA3O60609 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
GFRA3O60609 RNU6-1250P-201ENST00000391218 107 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms