Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 RNA5SP160-201ENST00000364866 120 ntBASIC1.83□□□□□ -2.12
SHOXO15266 Y_RNA.448-201ENST00000384185 108 ntBASIC1.83□□□□□ -2.12
SHOXO15266 SNORD38.2-201ENST00000384470 69 ntBASIC1.83□□□□□ -2.12
SHOXO15266 MIR588-201ENST00000384900 83 ntBASIC1.83□□□□□ -2.12
SHOXO15266 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.83□□□□□ -2.12
SHOXO15266 RNA5SP247-201ENST00000411181 105 ntBASIC1.83□□□□□ -2.12
SHOXO15266 AL353813.1-201ENST00000440700 253 ntBASIC1.83□□□□□ -2.12
SHOXO15266 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.83□□□□□ -2.12
SHOXO15266 AC133485.1-201ENST00000567176 124 ntBASIC1.83□□□□□ -2.12
SHOXO15266 MIR3122-201ENST00000577243 73 ntBASIC1.83□□□□□ -2.12
SHOXO15266 MIR3664-201ENST00000579074 99 ntBASIC1.83□□□□□ -2.12
SHOXO15266 MIR4439-201ENST00000583746 80 ntBASIC1.83□□□□□ -2.12
SHOXO15266 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.83□□□□□ -2.12
SHOXO15266 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
SHOXO15266 MIR377-201ENST00000362145 69 ntBASIC1.82□□□□□ -2.12
SHOXO15266 RNY1P13-201ENST00000365030 105 ntBASIC1.82□□□□□ -2.12
SHOXO15266 Y_RNA.466-201ENST00000384294 113 ntBASIC1.82□□□□□ -2.12
SHOXO15266 SNORA67.4-201ENST00000384688 142 ntBASIC1.82□□□□□ -2.12
SHOXO15266 MIR1302-7-201ENST00000408841 72 ntBASIC1.82□□□□□ -2.12
SHOXO15266 AC244023.1-201ENST00000426884 112 ntBASIC1.82□□□□□ -2.12
SHOXO15266 AC004941.2-201ENST00000427009 228 ntBASIC1.82□□□□□ -2.12
SHOXO15266 RPS29P28-201ENST00000446439 141 ntBASIC1.82□□□□□ -2.12
SHOXO15266 AC245517.4-201ENST00000448601 281 ntBASIC1.82□□□□□ -2.12
SHOXO15266 RNU6-548P-201ENST00000517083 115 ntBASIC1.82□□□□□ -2.12
SHOXO15266 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.82□□□□□ -2.12
SHOXO15266 AC242498.1-201ENST00000604134 111 ntBASIC1.82□□□□□ -2.12
SHOXO15266 MIR6132-201ENST00000622083 109 ntBASIC1.82□□□□□ -2.12
SHOXO15266 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.82□□□□□ -2.12
SHOXO15266 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
SHOXO15266 RNU6-170P-201ENST00000362832 104 ntBASIC1.81□□□□□ -2.12
SHOXO15266 SNORD38.1-201ENST00000363863 68 ntBASIC1.81□□□□□ -2.12
SHOXO15266 RNU6-949P-201ENST00000384040 107 ntBASIC1.81□□□□□ -2.12
SHOXO15266 RNU7-62P-201ENST00000458856 62 ntBASIC1.81□□□□□ -2.12
SHOXO15266 RNU7-48P-201ENST00000458875 63 ntBASIC1.81□□□□□ -2.12
SHOXO15266 RNA5SP445-201ENST00000515889 115 ntBASIC1.81□□□□□ -2.12
SHOXO15266 RNA5SP458-201ENST00000516188 119 ntBASIC1.81□□□□□ -2.12
SHOXO15266 AL512310.8-201ENST00000550183 120 ntBASIC1.81□□□□□ -2.12
SHOXO15266 AC015712.3-201ENST00000559380 164 ntBASIC1.81□□□□□ -2.12
SHOXO15266 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
SHOXO15266 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
SHOXO15266 MT-TF-201ENST00000387314 71 ntBASIC1.8□□□□□ -2.12
SHOXO15266 RNU1-78P-201ENST00000391248 165 ntBASIC1.8□□□□□ -2.12
SHOXO15266 RNU6-613P-201ENST00000410412 108 ntBASIC1.8□□□□□ -2.12
SHOXO15266 AP003716.2-201ENST00000528260 108 ntBASIC1.8□□□□□ -2.12
SHOXO15266 SNORA4-201ENST00000584302 138 ntBASIC1.8□□□□□ -2.12
SHOXO15266 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.8□□□□□ -2.12
SHOXO15266 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
SHOXO15266 Y_RNA.95-201ENST00000363079 95 ntBASIC1.79□□□□□ -2.12
SHOXO15266 MIR563-201ENST00000385080 79 ntBASIC1.79□□□□□ -2.12
SHOXO15266 MIR221-201ENST00000385135 110 ntBASIC1.79□□□□□ -2.12
SHOXO15266 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
SHOXO15266 RNU6-1321P-201ENST00000390905 107 ntBASIC1.79□□□□□ -2.12
SHOXO15266 MIR934-201ENST00000401241 83 ntBASIC1.79□□□□□ -2.12
SHOXO15266 RNU6-1165P-201ENST00000410119 107 ntBASIC1.79□□□□□ -2.12
SHOXO15266 MRPL35P3-201ENST00000421557 364 ntBASIC1.79□□□□□ -2.12
SHOXO15266 MALAT1.1-201ENST00000618249 95 ntBASIC1.79□□□□□ -2.12
SHOXO15266 AP001362.1-201ENST00000625165 124 ntBASIC1.79□□□□□ -2.12
SHOXO15266 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.79□□□□□ -2.12
SHOXO15266 RNU6-1131P-201ENST00000364955 107 ntBASIC1.78□□□□□ -2.12
SHOXO15266 SNORA48.3-201ENST00000391081 134 ntBASIC1.78□□□□□ -2.12
SHOXO15266 MIR1185-1-201ENST00000408598 86 ntBASIC1.78□□□□□ -2.12
SHOXO15266 AL445685.2-201ENST00000422551 342 ntBASIC1.78□□□□□ -2.12
SHOXO15266 MIR4648-201ENST00000580107 72 ntBASIC1.78□□□□□ -2.12
SHOXO15266 AC105081.1-201ENST00000617727 106 ntBASIC1.78□□□□□ -2.12
SHOXO15266 MIR6516-201ENST00000630554 81 ntBASIC1.78□□□□□ -2.12
SHOXO15266 RNU6-205P-201ENST00000390858 107 ntBASIC1.77□□□□□ -2.13
SHOXO15266 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.77□□□□□ -2.13
SHOXO15266 snoU13.25-201ENST00000458945 104 ntBASIC1.77□□□□□ -2.13
SHOXO15266 RNU6-795P-201ENST00000516323 103 ntBASIC1.77□□□□□ -2.13
SHOXO15266 RN7SKP88-201ENST00000516847 250 ntBASIC1.77□□□□□ -2.13
SHOXO15266 Y_RNA.705-201ENST00000516862 110 ntBASIC1.77□□□□□ -2.13
SHOXO15266 7SK.8-201ENST00000612110 250 ntBASIC1.77□□□□□ -2.13
SHOXO15266 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.77□□□□□ -2.13
SHOXO15266 MIR376B-201ENST00000614515 100 ntBASIC1.77□□□□□ -2.13
SHOXO15266 7SK.11-201ENST00000615477 250 ntBASIC1.77□□□□□ -2.13
SHOXO15266 AC012531.4-201ENST00000616509 177 ntBASIC1.77□□□□□ -2.13
SHOXO15266 MIR6740-201ENST00000618268 113 ntBASIC1.77□□□□□ -2.13
SHOXO15266 AL353997.5-201ENST00000618886 171 ntBASIC1.77□□□□□ -2.13
SHOXO15266 7SK.13-201ENST00000622040 250 ntBASIC1.77□□□□□ -2.13
SHOXO15266 RNU6-60P-201ENST00000364792 103 ntBASIC1.76□□□□□ -2.13
SHOXO15266 RNU6-294P-201ENST00000364999 102 ntBASIC1.76□□□□□ -2.13
SHOXO15266 Y_RNA.558-201ENST00000384685 113 ntBASIC1.76□□□□□ -2.13
SHOXO15266 MIR34C-201ENST00000384831 77 ntBASIC1.76□□□□□ -2.13
SHOXO15266 RNU4-53P-201ENST00000410828 140 ntBASIC1.76□□□□□ -2.13
SHOXO15266 AL356320.1-201ENST00000429616 163 ntBASIC1.76□□□□□ -2.13
SHOXO15266 AL591806.2-201ENST00000433122 173 ntBASIC1.76□□□□□ -2.13
SHOXO15266 RNU1-41P-201ENST00000516161 162 ntBASIC1.76□□□□□ -2.13
SHOXO15266 RNA5SP200-201ENST00000516360 103 ntBASIC1.76□□□□□ -2.13
SHOXO15266 RNU1-48P-201ENST00000516400 162 ntBASIC1.76□□□□□ -2.13
SHOXO15266 AC024614.2-201ENST00000577584 372 ntBASIC1.76□□□□□ -2.13
SHOXO15266 MIR6873-201ENST00000622788 63 ntBASIC1.76□□□□□ -2.13
SHOXO15266 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
SHOXO15266 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
SHOXO15266 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
SHOXO15266 RNA5SP289-201ENST00000362332 137 ntBASIC1.75□□□□□ -2.13
SHOXO15266 Y_RNA.168-201ENST00000363740 102 ntBASIC1.75□□□□□ -2.13
SHOXO15266 Y_RNA.342-201ENST00000365352 113 ntBASIC1.75□□□□□ -2.13
SHOXO15266 RNU6-1307P-201ENST00000391012 103 ntBASIC1.75□□□□□ -2.13
SHOXO15266 RNU6-972P-201ENST00000391208 107 ntBASIC1.75□□□□□ -2.13
SHOXO15266 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms