Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 SNORD41-201ENST00000386967 70 ntBASIC2.64□□□□□ -1.99
RNF223E7ERA6 RNU6-1052P-201ENST00000411398 104 ntBASIC2.64□□□□□ -1.99
RNF223E7ERA6 RNU6-274P-201ENST00000459566 107 ntBASIC2.64□□□□□ -1.99
RNF223E7ERA6 RN7SL274P-201ENST00000492268 272 ntBASIC2.64□□□□□ -1.99
RNF223E7ERA6 RNU6-719P-201ENST00000516671 104 ntBASIC2.64□□□□□ -1.99
RNF223E7ERA6 AC013244.2-201ENST00000603396 103 ntBASIC2.64□□□□□ -1.99
RNF223E7ERA6 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
RNF223E7ERA6 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC2.64□□□□□ -1.99
RNF223E7ERA6 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
RNF223E7ERA6 MIR30E-201ENST00000362104 92 ntBASIC2.63□□□□□ -1.99
RNF223E7ERA6 EEF1A1P41-201ENST00000414667 207 ntBASIC2.63□□□□□ -1.99
RNF223E7ERA6 AP004217.1-201ENST00000480579 346 ntBASIC2.63□□□□□ -1.99
RNF223E7ERA6 MIR514B-201ENST00000516774 80 ntBASIC2.63□□□□□ -1.99
RNF223E7ERA6 SNORA31.17-201ENST00000516953 127 ntBASIC2.63□□□□□ -1.99
RNF223E7ERA6 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.63□□□□□ -1.99
RNF223E7ERA6 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
RNF223E7ERA6 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
RNF223E7ERA6 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC2.62□□□□□ -1.99
RNF223E7ERA6 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.62□□□□□ -1.99
RNF223E7ERA6 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
RNF223E7ERA6 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
RNF223E7ERA6 MIR377-201ENST00000362145 69 ntBASIC2.62□□□□□ -1.99
RNF223E7ERA6 RNU6-654P-201ENST00000364373 107 ntBASIC2.62□□□□□ -1.99
RNF223E7ERA6 SNORD15B-201ENST00000384714 146 ntBASIC2.62□□□□□ -1.99
RNF223E7ERA6 RNU6-1177P-201ENST00000391058 104 ntBASIC2.62□□□□□ -1.99
RNF223E7ERA6 MIR18B-201ENST00000454574 71 ntBASIC2.62□□□□□ -1.99
RNF223E7ERA6 RNA5SP356-201ENST00000515972 94 ntBASIC2.62□□□□□ -1.99
RNF223E7ERA6 MIR4773-1-201ENST00000637203 78 ntBASIC2.62□□□□□ -1.99
RNF223E7ERA6 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
RNF223E7ERA6 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
RNF223E7ERA6 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
RNF223E7ERA6 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
RNF223E7ERA6 SNORA48.8-201ENST00000391324 134 ntBASIC2.61□□□□□ -1.99
RNF223E7ERA6 RNU6-1054P-201ENST00000411293 104 ntBASIC2.61□□□□□ -1.99
RNF223E7ERA6 UBBP3-201ENST00000445497 241 ntBASIC2.61□□□□□ -1.99
RNF223E7ERA6 AC097635.1-201ENST00000450678 155 ntBASIC2.61□□□□□ -1.99
RNF223E7ERA6 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
RNF223E7ERA6 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
RNF223E7ERA6 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
RNF223E7ERA6 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
RNF223E7ERA6 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC2.6□□□□□ -1.99
RNF223E7ERA6 RNU6-1079P-201ENST00000362861 110 ntBASIC2.6□□□□□ -1.99
RNF223E7ERA6 AC244098.3-201ENST00000424803 96 ntBASIC2.6□□□□□ -1.99
RNF223E7ERA6 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.6□□□□□ -1.99
RNF223E7ERA6 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
RNF223E7ERA6 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
RNF223E7ERA6 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
RNF223E7ERA6 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
RNF223E7ERA6 RNA5SP259-201ENST00000365541 109 ntBASIC2.59□□□□□ -1.99
RNF223E7ERA6 SNORA54-201ENST00000384281 123 ntBASIC2.59□□□□□ -1.99
RNF223E7ERA6 SNORD67-201ENST00000390833 111 ntBASIC2.59□□□□□ -1.99
RNF223E7ERA6 RNA5SP229-201ENST00000410809 99 ntBASIC2.59□□□□□ -1.99
RNF223E7ERA6 RNU6-542P-201ENST00000516405 103 ntBASIC2.59□□□□□ -1.99
RNF223E7ERA6 RNU6-922P-201ENST00000516753 99 ntBASIC2.59□□□□□ -1.99
RNF223E7ERA6 Y_RNA.697-201ENST00000516776 113 ntBASIC2.59□□□□□ -1.99
RNF223E7ERA6 MIR2276-201ENST00000516886 89 ntBASIC2.59□□□□□ -1.99
RNF223E7ERA6 Y_RNA.722-201ENST00000517279 114 ntBASIC2.59□□□□□ -1.99
RNF223E7ERA6 MIR6516-201ENST00000630554 81 ntBASIC2.59□□□□□ -1.99
RNF223E7ERA6 MIR622-201ENST00000638396 96 ntBASIC2.59□□□□□ -1.99
RNF223E7ERA6 AL035425.3-201ENST00000564206 4996 ntBASIC2.59□□□□□ -2
RNF223E7ERA6 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -2
RNF223E7ERA6 MIR22-201ENST00000362190 85 ntBASIC2.58□□□□□ -2
RNF223E7ERA6 RNU6-382P-201ENST00000365181 106 ntBASIC2.58□□□□□ -2
RNF223E7ERA6 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.58□□□□□ -2
RNF223E7ERA6 RNU6-982P-201ENST00000516216 102 ntBASIC2.58□□□□□ -2
RNF223E7ERA6 SNRPGP19-201ENST00000603826 189 ntBASIC2.58□□□□□ -2
RNF223E7ERA6 AC092634.7-201ENST00000621022 103 ntBASIC2.58□□□□□ -2
RNF223E7ERA6 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.58□□□□□ -2
RNF223E7ERA6 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
RNF223E7ERA6 SNORA16B-201ENST00000364674 135 ntBASIC2.57□□□□□ -2
RNF223E7ERA6 MIR513A1-201ENST00000385138 129 ntBASIC2.57□□□□□ -2
RNF223E7ERA6 U3.27-201ENST00000391237 200 ntBASIC2.57□□□□□ -2
RNF223E7ERA6 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.57□□□□□ -2
RNF223E7ERA6 MTND4LP1-201ENST00000446263 157 ntBASIC2.57□□□□□ -2
RNF223E7ERA6 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
RNF223E7ERA6 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.57□□□□□ -2
RNF223E7ERA6 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
RNF223E7ERA6 RNU6-668P-201ENST00000364180 107 ntBASIC2.56□□□□□ -2
RNF223E7ERA6 RNU6-580P-201ENST00000365159 107 ntBASIC2.56□□□□□ -2
RNF223E7ERA6 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.56□□□□□ -2
RNF223E7ERA6 RNU7-170P-201ENST00000459303 61 ntBASIC2.56□□□□□ -2
RNF223E7ERA6 RN7SL442P-201ENST00000473804 320 ntBASIC2.56□□□□□ -2
RNF223E7ERA6 RNU6-1265P-201ENST00000516342 103 ntBASIC2.56□□□□□ -2
RNF223E7ERA6 MIR4319-201ENST00000577285 85 ntBASIC2.56□□□□□ -2
RNF223E7ERA6 MIR466-201ENST00000580653 84 ntBASIC2.56□□□□□ -2
RNF223E7ERA6 MIR3162-201ENST00000581818 82 ntBASIC2.56□□□□□ -2
RNF223E7ERA6 AC104984.5-201ENST00000586878 94 ntBASIC2.56□□□□□ -2
RNF223E7ERA6 MIR6082-201ENST00000613604 109 ntBASIC2.56□□□□□ -2
RNF223E7ERA6 RNU6-940P-201ENST00000363433 104 ntBASIC2.55□□□□□ -2
RNF223E7ERA6 Y_RNA.258-201ENST00000364613 105 ntBASIC2.55□□□□□ -2
RNF223E7ERA6 MIR599-201ENST00000385069 95 ntBASIC2.55□□□□□ -2
RNF223E7ERA6 RNU6-808P-201ENST00000391233 108 ntBASIC2.55□□□□□ -2
RNF223E7ERA6 AL161935.2-201ENST00000414627 60 ntBASIC2.55□□□□□ -2
RNF223E7ERA6 AL159169.1-201ENST00000421119 127 ntBASIC2.55□□□□□ -2
RNF223E7ERA6 Z96811.1-201ENST00000445880 108 ntBASIC2.55□□□□□ -2
RNF223E7ERA6 RNU6-1057P-201ENST00000517162 102 ntBASIC2.55□□□□□ -2
RNF223E7ERA6 MIR6715A-201ENST00000615929 79 ntBASIC2.55□□□□□ -2
RNF223E7ERA6 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.55□□□□□ -2
RNF223E7ERA6 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.55□□□□□ -2
RNF223E7ERA6 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms