Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.07■□□□□ 0.64
RAI2Q9Y5P3 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.07■□□□□ 0.64
RAI2Q9Y5P3 AL353719.1-201ENST00000566847 864 ntBASIC19.07■□□□□ 0.64
RAI2Q9Y5P3 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.07■□□□□ 0.64
RAI2Q9Y5P3 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
RAI2Q9Y5P3 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RAI2Q9Y5P3 AC008622.2-201ENST00000617006 1229 ntBASIC19.07■□□□□ 0.64
RAI2Q9Y5P3 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
RAI2Q9Y5P3 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RAI2Q9Y5P3 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
RAI2Q9Y5P3 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RAI2Q9Y5P3 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.07■□□□□ 0.64
RAI2Q9Y5P3 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.07■□□□□ 0.64
RAI2Q9Y5P3 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RAI2Q9Y5P3 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
RAI2Q9Y5P3 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RAI2Q9Y5P3 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RAI2Q9Y5P3 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RAI2Q9Y5P3 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
RAI2Q9Y5P3 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
RAI2Q9Y5P3 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAI2Q9Y5P3 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RAI2Q9Y5P3 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAI2Q9Y5P3 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RAI2Q9Y5P3 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAI2Q9Y5P3 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAI2Q9Y5P3 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.06■□□□□ 0.64
RAI2Q9Y5P3 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.06■□□□□ 0.64
RAI2Q9Y5P3 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RAI2Q9Y5P3 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RAI2Q9Y5P3 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RAI2Q9Y5P3 TERF1P1-201ENST00000311003 1181 ntBASIC19.06■□□□□ 0.64
RAI2Q9Y5P3 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.06■□□□□ 0.64
RAI2Q9Y5P3 INGX-201ENST00000359239 846 ntBASIC19.06■□□□□ 0.64
RAI2Q9Y5P3 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.06■□□□□ 0.64
RAI2Q9Y5P3 AL137013.1-201ENST00000432946 1228 ntBASIC19.06■□□□□ 0.64
RAI2Q9Y5P3 DUX4L26-201ENST00000489078 1255 ntBASIC19.06■□□□□ 0.64
RAI2Q9Y5P3 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RAI2Q9Y5P3 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.06■□□□□ 0.64
RAI2Q9Y5P3 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAI2Q9Y5P3 AC092338.2-201ENST00000568827 1415 ntBASIC19.06■□□□□ 0.64
RAI2Q9Y5P3 AP000974.1-201ENST00000623909 2387 ntBASIC19.06■□□□□ 0.64
RAI2Q9Y5P3 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAI2Q9Y5P3 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAI2Q9Y5P3 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.06■□□□□ 0.64
RAI2Q9Y5P3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.06■□□□□ 0.64
RAI2Q9Y5P3 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RAI2Q9Y5P3 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
RAI2Q9Y5P3 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAI2Q9Y5P3 AL512353.2-201ENST00000448759 1962 ntBASIC19.05■□□□□ 0.64
RAI2Q9Y5P3 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.05■□□□□ 0.64
RAI2Q9Y5P3 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RAI2Q9Y5P3 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
RAI2Q9Y5P3 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RAI2Q9Y5P3 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.05■□□□□ 0.64
RAI2Q9Y5P3 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.05■□□□□ 0.64
RAI2Q9Y5P3 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.05■□□□□ 0.64
RAI2Q9Y5P3 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.05■□□□□ 0.64
RAI2Q9Y5P3 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAI2Q9Y5P3 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAI2Q9Y5P3 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAI2Q9Y5P3 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
RAI2Q9Y5P3 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAI2Q9Y5P3 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAI2Q9Y5P3 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
RAI2Q9Y5P3 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAI2Q9Y5P3 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RAI2Q9Y5P3 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
RAI2Q9Y5P3 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.04■□□□□ 0.64
RAI2Q9Y5P3 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAI2Q9Y5P3 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAI2Q9Y5P3 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAI2Q9Y5P3 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAI2Q9Y5P3 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAI2Q9Y5P3 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAI2Q9Y5P3 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAI2Q9Y5P3 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAI2Q9Y5P3 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAI2Q9Y5P3 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAI2Q9Y5P3 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAI2Q9Y5P3 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RAI2Q9Y5P3 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAI2Q9Y5P3 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAI2Q9Y5P3 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.04■□□□□ 0.64
RAI2Q9Y5P3 AC007663.1-201ENST00000438948 1240 ntBASIC19.04■□□□□ 0.64
RAI2Q9Y5P3 AC128688.1-201ENST00000487626 519 ntBASIC19.04■□□□□ 0.64
RAI2Q9Y5P3 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
RAI2Q9Y5P3 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.04■□□□□ 0.64
RAI2Q9Y5P3 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.04■□□□□ 0.64
RAI2Q9Y5P3 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.04■□□□□ 0.64
RAI2Q9Y5P3 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
RAI2Q9Y5P3 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.04■□□□□ 0.64
RAI2Q9Y5P3 AC073508.3-201ENST00000619697 1419 ntBASIC19.04■□□□□ 0.64
RAI2Q9Y5P3 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.04■□□□□ 0.64
RAI2Q9Y5P3 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAI2Q9Y5P3 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RAI2Q9Y5P3 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RAI2Q9Y5P3 AC018445.3-201ENST00000624177 1945 ntBASIC19.04■□□□□ 0.64
RAI2Q9Y5P3 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAI2Q9Y5P3 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms