Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 AL031133.1-201ENST00000406807 723 ntBASIC19.15■□□□□ 0.66
PCDHB9Q9Y5E1 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.15■□□□□ 0.66
PCDHB9Q9Y5E1 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB9Q9Y5E1 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB9Q9Y5E1 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.15■□□□□ 0.66
PCDHB9Q9Y5E1 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB9Q9Y5E1 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDHB9Q9Y5E1 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB9Q9Y5E1 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB9Q9Y5E1 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
PCDHB9Q9Y5E1 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PCDHB9Q9Y5E1 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDHB9Q9Y5E1 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB9Q9Y5E1 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB9Q9Y5E1 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB9Q9Y5E1 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.14■□□□□ 0.66
PCDHB9Q9Y5E1 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PCDHB9Q9Y5E1 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PCDHB9Q9Y5E1 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.14■□□□□ 0.66
PCDHB9Q9Y5E1 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.14■□□□□ 0.66
PCDHB9Q9Y5E1 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHB9Q9Y5E1 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHB9Q9Y5E1 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
PCDHB9Q9Y5E1 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHB9Q9Y5E1 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHB9Q9Y5E1 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHB9Q9Y5E1 TSPY5P-201ENST00000426936 936 ntBASIC19.14■□□□□ 0.65
PCDHB9Q9Y5E1 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.14■□□□□ 0.65
PCDHB9Q9Y5E1 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.14■□□□□ 0.65
PCDHB9Q9Y5E1 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.65
PCDHB9Q9Y5E1 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
PCDHB9Q9Y5E1 AL161938.1-201ENST00000569833 2180 ntBASIC19.14■□□□□ 0.65
PCDHB9Q9Y5E1 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHB9Q9Y5E1 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
PCDHB9Q9Y5E1 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHB9Q9Y5E1 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.14■□□□□ 0.65
PCDHB9Q9Y5E1 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHB9Q9Y5E1 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
PCDHB9Q9Y5E1 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHB9Q9Y5E1 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHB9Q9Y5E1 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
PCDHB9Q9Y5E1 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
PCDHB9Q9Y5E1 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
PCDHB9Q9Y5E1 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.14■□□□□ 0.65
PCDHB9Q9Y5E1 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHB9Q9Y5E1 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
PCDHB9Q9Y5E1 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHB9Q9Y5E1 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHB9Q9Y5E1 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHB9Q9Y5E1 INGX-201ENST00000359239 846 ntBASIC19.13■□□□□ 0.65
PCDHB9Q9Y5E1 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.13■□□□□ 0.65
PCDHB9Q9Y5E1 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDHB9Q9Y5E1 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHB9Q9Y5E1 COX11P1-201ENST00000489116 835 ntBASIC19.13■□□□□ 0.65
PCDHB9Q9Y5E1 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.13■□□□□ 0.65
PCDHB9Q9Y5E1 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.13■□□□□ 0.65
PCDHB9Q9Y5E1 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.13■□□□□ 0.65
PCDHB9Q9Y5E1 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.13■□□□□ 0.65
PCDHB9Q9Y5E1 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.13■□□□□ 0.65
PCDHB9Q9Y5E1 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.13■□□□□ 0.65
PCDHB9Q9Y5E1 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHB9Q9Y5E1 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHB9Q9Y5E1 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHB9Q9Y5E1 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
PCDHB9Q9Y5E1 AL049812.1-201ENST00000432563 2267 ntBASIC19.13■□□□□ 0.65
PCDHB9Q9Y5E1 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHB9Q9Y5E1 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB9Q9Y5E1 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB9Q9Y5E1 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDHB9Q9Y5E1 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB9Q9Y5E1 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB9Q9Y5E1 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDHB9Q9Y5E1 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB9Q9Y5E1 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.12■□□□□ 0.65
PCDHB9Q9Y5E1 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB9Q9Y5E1 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.12■□□□□ 0.65
PCDHB9Q9Y5E1 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB9Q9Y5E1 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB9Q9Y5E1 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.12■□□□□ 0.65
PCDHB9Q9Y5E1 CA15P1-201ENST00000481698 905 ntBASIC19.12■□□□□ 0.65
PCDHB9Q9Y5E1 YBX1P2-201ENST00000489612 999 ntBASIC19.12■□□□□ 0.65
PCDHB9Q9Y5E1 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDHB9Q9Y5E1 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB9Q9Y5E1 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB9Q9Y5E1 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB9Q9Y5E1 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.11■□□□□ 0.65
PCDHB9Q9Y5E1 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB9Q9Y5E1 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB9Q9Y5E1 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB9Q9Y5E1 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB9Q9Y5E1 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB9Q9Y5E1 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDHB9Q9Y5E1 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB9Q9Y5E1 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PCDHB9Q9Y5E1 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB9Q9Y5E1 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
PCDHB9Q9Y5E1 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB9Q9Y5E1 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB9Q9Y5E1 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB9Q9Y5E1 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms