Protein–RNA interactions for Protein: Q9Y223

GNE, Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase, humanhuman

Known RBP Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GNEQ9Y223 KRT18P1-202ENST00000452408 1331 ntBASIC21■□□□□ 0.95
GNEQ9Y223 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
GNEQ9Y223 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GNEQ9Y223 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GNEQ9Y223 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GNEQ9Y223 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
GNEQ9Y223 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GNEQ9Y223 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
GNEQ9Y223 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
GNEQ9Y223 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GNEQ9Y223 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.99■□□□□ 0.95
GNEQ9Y223 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GNEQ9Y223 AC004870.1-201ENST00000315132 882 ntBASIC20.99■□□□□ 0.95
GNEQ9Y223 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GNEQ9Y223 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
GNEQ9Y223 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GNEQ9Y223 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
GNEQ9Y223 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.99■□□□□ 0.95
GNEQ9Y223 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.99■□□□□ 0.95
GNEQ9Y223 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GNEQ9Y223 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.99■□□□□ 0.95
GNEQ9Y223 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.99■□□□□ 0.95
GNEQ9Y223 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GNEQ9Y223 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GNEQ9Y223 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
GNEQ9Y223 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.98■□□□□ 0.95
GNEQ9Y223 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GNEQ9Y223 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
GNEQ9Y223 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
GNEQ9Y223 FAAHP1-202ENST00000446499 1238 ntBASIC20.98■□□□□ 0.95
GNEQ9Y223 KRT17P6-201ENST00000453795 1220 ntBASIC20.98■□□□□ 0.95
GNEQ9Y223 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC20.98■□□□□ 0.95
GNEQ9Y223 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.98■□□□□ 0.95
GNEQ9Y223 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC20.98■□□□□ 0.95
GNEQ9Y223 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
GNEQ9Y223 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.98■□□□□ 0.95
GNEQ9Y223 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GNEQ9Y223 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.98■□□□□ 0.95
GNEQ9Y223 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.98■□□□□ 0.95
GNEQ9Y223 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
GNEQ9Y223 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.98■□□□□ 0.95
GNEQ9Y223 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
GNEQ9Y223 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GNEQ9Y223 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GNEQ9Y223 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
GNEQ9Y223 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GNEQ9Y223 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
GNEQ9Y223 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
GNEQ9Y223 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
GNEQ9Y223 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
GNEQ9Y223 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GNEQ9Y223 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.97■□□□□ 0.95
GNEQ9Y223 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.97■□□□□ 0.95
GNEQ9Y223 MIR564-202ENST00000385049 94 ntBASIC20.97■□□□□ 0.95
GNEQ9Y223 TSPY19P-201ENST00000418461 509 ntBASIC20.97■□□□□ 0.95
GNEQ9Y223 TSPY18P-201ENST00000441642 509 ntBASIC20.97■□□□□ 0.95
GNEQ9Y223 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
GNEQ9Y223 KLK8-205ENST00000593490 267 ntTSL 3 BASIC20.97■□□□□ 0.95
GNEQ9Y223 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.97■□□□□ 0.95
GNEQ9Y223 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20.97■□□□□ 0.95
GNEQ9Y223 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
GNEQ9Y223 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
GNEQ9Y223 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GNEQ9Y223 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GNEQ9Y223 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.97■□□□□ 0.95
GNEQ9Y223 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
GNEQ9Y223 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.97■□□□□ 0.95
GNEQ9Y223 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
GNEQ9Y223 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.97■□□□□ 0.95
GNEQ9Y223 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
GNEQ9Y223 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
GNEQ9Y223 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GNEQ9Y223 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GNEQ9Y223 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.96■□□□□ 0.95
GNEQ9Y223 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
GNEQ9Y223 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GNEQ9Y223 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GNEQ9Y223 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.96■□□□□ 0.95
GNEQ9Y223 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GNEQ9Y223 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
GNEQ9Y223 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GNEQ9Y223 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GNEQ9Y223 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.96■□□□□ 0.95
GNEQ9Y223 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
GNEQ9Y223 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
GNEQ9Y223 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GNEQ9Y223 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
GNEQ9Y223 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
GNEQ9Y223 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.96■□□□□ 0.95
GNEQ9Y223 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.96■□□□□ 0.95
GNEQ9Y223 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.96■□□□□ 0.95
GNEQ9Y223 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
GNEQ9Y223 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
GNEQ9Y223 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GNEQ9Y223 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GNEQ9Y223 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
GNEQ9Y223 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.96■□□□□ 0.95
GNEQ9Y223 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
GNEQ9Y223 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GNEQ9Y223 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms