Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GTF3C4Q9UKN8 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
GTF3C4Q9UKN8 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
GTF3C4Q9UKN8 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GTF3C4Q9UKN8 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GTF3C4Q9UKN8 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GTF3C4Q9UKN8 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
GTF3C4Q9UKN8 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GTF3C4Q9UKN8 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GTF3C4Q9UKN8 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.29■□□□□ 0.84
GTF3C4Q9UKN8 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
GTF3C4Q9UKN8 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GTF3C4Q9UKN8 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
GTF3C4Q9UKN8 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GTF3C4Q9UKN8 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GTF3C4Q9UKN8 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GTF3C4Q9UKN8 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
GTF3C4Q9UKN8 AL137013.1-201ENST00000432946 1228 ntBASIC20.29■□□□□ 0.84
GTF3C4Q9UKN8 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GTF3C4Q9UKN8 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.29■□□□□ 0.84
GTF3C4Q9UKN8 CCR12P-201ENST00000446203 998 ntBASIC20.29■□□□□ 0.84
GTF3C4Q9UKN8 FAM87A-204ENST00000613235 858 ntBASIC20.29■□□□□ 0.84
GTF3C4Q9UKN8 AL023803.3-201ENST00000615559 522 ntBASIC20.29■□□□□ 0.84
GTF3C4Q9UKN8 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
GTF3C4Q9UKN8 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GTF3C4Q9UKN8 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
GTF3C4Q9UKN8 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GTF3C4Q9UKN8 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.29■□□□□ 0.84
GTF3C4Q9UKN8 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
GTF3C4Q9UKN8 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
GTF3C4Q9UKN8 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GTF3C4Q9UKN8 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
GTF3C4Q9UKN8 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GTF3C4Q9UKN8 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GTF3C4Q9UKN8 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.29■□□□□ 0.84
GTF3C4Q9UKN8 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.28■□□□□ 0.84
GTF3C4Q9UKN8 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.28■□□□□ 0.84
GTF3C4Q9UKN8 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
GTF3C4Q9UKN8 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.28■□□□□ 0.84
GTF3C4Q9UKN8 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GTF3C4Q9UKN8 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.28■□□□□ 0.84
GTF3C4Q9UKN8 TERF1P1-201ENST00000311003 1181 ntBASIC20.28■□□□□ 0.84
GTF3C4Q9UKN8 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.28■□□□□ 0.84
GTF3C4Q9UKN8 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
GTF3C4Q9UKN8 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GTF3C4Q9UKN8 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.28■□□□□ 0.84
GTF3C4Q9UKN8 TMPOP1-202ENST00000424642 1267 ntBASIC20.28■□□□□ 0.84
GTF3C4Q9UKN8 TSPY23P-201ENST00000440136 739 ntBASIC20.28■□□□□ 0.84
GTF3C4Q9UKN8 AC010203.1-204ENST00000548782 407 ntBASIC20.28■□□□□ 0.84
GTF3C4Q9UKN8 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
GTF3C4Q9UKN8 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
GTF3C4Q9UKN8 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GTF3C4Q9UKN8 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.28■□□□□ 0.84
GTF3C4Q9UKN8 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
GTF3C4Q9UKN8 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GTF3C4Q9UKN8 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
GTF3C4Q9UKN8 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GTF3C4Q9UKN8 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.27■□□□□ 0.84
GTF3C4Q9UKN8 AC092338.2-201ENST00000568827 1415 ntBASIC20.27■□□□□ 0.84
GTF3C4Q9UKN8 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GTF3C4Q9UKN8 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
GTF3C4Q9UKN8 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
GTF3C4Q9UKN8 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.27■□□□□ 0.84
GTF3C4Q9UKN8 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
GTF3C4Q9UKN8 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GTF3C4Q9UKN8 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
GTF3C4Q9UKN8 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GTF3C4Q9UKN8 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GTF3C4Q9UKN8 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
GTF3C4Q9UKN8 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GTF3C4Q9UKN8 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
GTF3C4Q9UKN8 AC007663.1-201ENST00000438948 1240 ntBASIC20.27■□□□□ 0.84
GTF3C4Q9UKN8 KRT18P57-201ENST00000443599 1254 ntBASIC20.27■□□□□ 0.84
GTF3C4Q9UKN8 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.27■□□□□ 0.84
GTF3C4Q9UKN8 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.27■□□□□ 0.84
GTF3C4Q9UKN8 AC092865.7-201ENST00000641832 219 ntBASIC20.27■□□□□ 0.84
GTF3C4Q9UKN8 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
GTF3C4Q9UKN8 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GTF3C4Q9UKN8 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GTF3C4Q9UKN8 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
GTF3C4Q9UKN8 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.27■□□□□ 0.83
GTF3C4Q9UKN8 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.27■□□□□ 0.83
GTF3C4Q9UKN8 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
GTF3C4Q9UKN8 AC073508.3-201ENST00000619697 1419 ntBASIC20.27■□□□□ 0.83
GTF3C4Q9UKN8 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.26■□□□□ 0.83
GTF3C4Q9UKN8 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GTF3C4Q9UKN8 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
GTF3C4Q9UKN8 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.26■□□□□ 0.83
GTF3C4Q9UKN8 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
GTF3C4Q9UKN8 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GTF3C4Q9UKN8 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
GTF3C4Q9UKN8 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GTF3C4Q9UKN8 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.26■□□□□ 0.83
GTF3C4Q9UKN8 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.26■□□□□ 0.83
GTF3C4Q9UKN8 CA15P1-201ENST00000481698 905 ntBASIC20.26■□□□□ 0.83
GTF3C4Q9UKN8 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
GTF3C4Q9UKN8 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GTF3C4Q9UKN8 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GTF3C4Q9UKN8 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GTF3C4Q9UKN8 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms