Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.67■□□□□ 0.74
DNMT3BQ9UBC3 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.67■□□□□ 0.74
DNMT3BQ9UBC3 AL121672.3-201ENST00000608644 468 ntBASIC19.67■□□□□ 0.74
DNMT3BQ9UBC3 AL691432.3-201ENST00000621860 400 ntBASIC19.67■□□□□ 0.74
DNMT3BQ9UBC3 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DNMT3BQ9UBC3 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DNMT3BQ9UBC3 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.67■□□□□ 0.74
DNMT3BQ9UBC3 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DNMT3BQ9UBC3 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
DNMT3BQ9UBC3 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
DNMT3BQ9UBC3 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
DNMT3BQ9UBC3 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DNMT3BQ9UBC3 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.66■□□□□ 0.74
DNMT3BQ9UBC3 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DNMT3BQ9UBC3 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
DNMT3BQ9UBC3 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.66■□□□□ 0.74
DNMT3BQ9UBC3 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DNMT3BQ9UBC3 HLA-F-220ENST00000434407 884 ntBASIC19.66■□□□□ 0.74
DNMT3BQ9UBC3 AP002383.4-201ENST00000442518 975 ntBASIC19.66■□□□□ 0.74
DNMT3BQ9UBC3 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.66■□□□□ 0.74
DNMT3BQ9UBC3 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.66■□□□□ 0.74
DNMT3BQ9UBC3 MIR3652-201ENST00000579335 131 ntBASIC19.66■□□□□ 0.74
DNMT3BQ9UBC3 MIR3180-1-201ENST00000580374 94 ntBASIC19.66■□□□□ 0.74
DNMT3BQ9UBC3 MIR3180-3-201ENST00000584616 94 ntBASIC19.66■□□□□ 0.74
DNMT3BQ9UBC3 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.66■□□□□ 0.74
DNMT3BQ9UBC3 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
DNMT3BQ9UBC3 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
DNMT3BQ9UBC3 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DNMT3BQ9UBC3 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
DNMT3BQ9UBC3 Z82202.1-201ENST00000623446 1880 ntBASIC19.66■□□□□ 0.74
DNMT3BQ9UBC3 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DNMT3BQ9UBC3 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.66■□□□□ 0.74
DNMT3BQ9UBC3 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
DNMT3BQ9UBC3 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DNMT3BQ9UBC3 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
DNMT3BQ9UBC3 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.66■□□□□ 0.74
DNMT3BQ9UBC3 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
DNMT3BQ9UBC3 AL162741.1-201ENST00000565563 1558 ntBASIC19.66■□□□□ 0.74
DNMT3BQ9UBC3 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.65■□□□□ 0.74
DNMT3BQ9UBC3 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
DNMT3BQ9UBC3 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
DNMT3BQ9UBC3 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DNMT3BQ9UBC3 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
DNMT3BQ9UBC3 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DNMT3BQ9UBC3 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.65■□□□□ 0.74
DNMT3BQ9UBC3 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DNMT3BQ9UBC3 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
DNMT3BQ9UBC3 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.65■□□□□ 0.74
DNMT3BQ9UBC3 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.65■□□□□ 0.74
DNMT3BQ9UBC3 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.65■□□□□ 0.74
DNMT3BQ9UBC3 MIR3917-201ENST00000580971 93 ntBASIC19.65■□□□□ 0.74
DNMT3BQ9UBC3 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.65■□□□□ 0.74
DNMT3BQ9UBC3 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
DNMT3BQ9UBC3 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.65■□□□□ 0.74
DNMT3BQ9UBC3 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
DNMT3BQ9UBC3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.65■□□□□ 0.74
DNMT3BQ9UBC3 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DNMT3BQ9UBC3 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
DNMT3BQ9UBC3 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DNMT3BQ9UBC3 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DNMT3BQ9UBC3 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
DNMT3BQ9UBC3 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DNMT3BQ9UBC3 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.64■□□□□ 0.73
DNMT3BQ9UBC3 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.64■□□□□ 0.73
DNMT3BQ9UBC3 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.64■□□□□ 0.73
DNMT3BQ9UBC3 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.64■□□□□ 0.73
DNMT3BQ9UBC3 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.64■□□□□ 0.73
DNMT3BQ9UBC3 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.64■□□□□ 0.73
DNMT3BQ9UBC3 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.64■□□□□ 0.73
DNMT3BQ9UBC3 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.64■□□□□ 0.73
DNMT3BQ9UBC3 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
DNMT3BQ9UBC3 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
DNMT3BQ9UBC3 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
DNMT3BQ9UBC3 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
DNMT3BQ9UBC3 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
DNMT3BQ9UBC3 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DNMT3BQ9UBC3 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DNMT3BQ9UBC3 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.64■□□□□ 0.73
DNMT3BQ9UBC3 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
DNMT3BQ9UBC3 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
DNMT3BQ9UBC3 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DNMT3BQ9UBC3 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
DNMT3BQ9UBC3 AL391807.1-203ENST00000604392 2365 ntBASIC19.63■□□□□ 0.73
DNMT3BQ9UBC3 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
DNMT3BQ9UBC3 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
DNMT3BQ9UBC3 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
DNMT3BQ9UBC3 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.63■□□□□ 0.73
DNMT3BQ9UBC3 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DNMT3BQ9UBC3 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
DNMT3BQ9UBC3 TEX21P-204ENST00000641479 1693 ntBASIC19.63■□□□□ 0.73
DNMT3BQ9UBC3 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
DNMT3BQ9UBC3 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
DNMT3BQ9UBC3 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DNMT3BQ9UBC3 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
DNMT3BQ9UBC3 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
DNMT3BQ9UBC3 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
DNMT3BQ9UBC3 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
DNMT3BQ9UBC3 AL136038.4-201ENST00000603606 1261 ntBASIC19.63■□□□□ 0.73
DNMT3BQ9UBC3 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.63■□□□□ 0.73
DNMT3BQ9UBC3 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms