Protein–RNA interactions for Protein: Q9NY27

PPP4R2, Serine/threonine-protein phosphatase 4 regulatory subunit 2, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R2Q9NY27 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
PPP4R2Q9NY27 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PPP4R2Q9NY27 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
PPP4R2Q9NY27 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
PPP4R2Q9NY27 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
PPP4R2Q9NY27 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PPP4R2Q9NY27 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PPP4R2Q9NY27 RER1-204ENST00000378518 522 ntTSL 3 BASIC24.15■■□□□ 1.46
PPP4R2Q9NY27 TSPY21P-201ENST00000433481 731 ntBASIC24.15■■□□□ 1.46
PPP4R2Q9NY27 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PPP4R2Q9NY27 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PPP4R2Q9NY27 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC24.15■■□□□ 1.46
PPP4R2Q9NY27 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
PPP4R2Q9NY27 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC24.15■■□□□ 1.46
PPP4R2Q9NY27 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PPP4R2Q9NY27 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PPP4R2Q9NY27 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC24.15■■□□□ 1.46
PPP4R2Q9NY27 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PPP4R2Q9NY27 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC24.15■■□□□ 1.46
PPP4R2Q9NY27 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
PPP4R2Q9NY27 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC24.14■■□□□ 1.46
PPP4R2Q9NY27 AC138028.4-201ENST00000564984 1845 ntBASIC24.14■■□□□ 1.46
PPP4R2Q9NY27 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC24.14■■□□□ 1.46
PPP4R2Q9NY27 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC24.14■■□□□ 1.46
PPP4R2Q9NY27 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
PPP4R2Q9NY27 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PPP4R2Q9NY27 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PPP4R2Q9NY27 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC24.14■■□□□ 1.45
PPP4R2Q9NY27 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
PPP4R2Q9NY27 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC24.14■■□□□ 1.45
PPP4R2Q9NY27 AC093677.2-201ENST00000600169 1863 ntBASIC24.14■■□□□ 1.45
PPP4R2Q9NY27 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC24.14■■□□□ 1.45
PPP4R2Q9NY27 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
PPP4R2Q9NY27 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PPP4R2Q9NY27 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
PPP4R2Q9NY27 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
PPP4R2Q9NY27 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC24.13■■□□□ 1.45
PPP4R2Q9NY27 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC24.13■■□□□ 1.45
PPP4R2Q9NY27 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC24.13■■□□□ 1.45
PPP4R2Q9NY27 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC24.13■■□□□ 1.45
PPP4R2Q9NY27 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC24.13■■□□□ 1.45
PPP4R2Q9NY27 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
PPP4R2Q9NY27 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
PPP4R2Q9NY27 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PPP4R2Q9NY27 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC24.13■■□□□ 1.45
PPP4R2Q9NY27 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
PPP4R2Q9NY27 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
PPP4R2Q9NY27 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC24.13■■□□□ 1.45
PPP4R2Q9NY27 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PPP4R2Q9NY27 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC24.13■■□□□ 1.45
PPP4R2Q9NY27 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
PPP4R2Q9NY27 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PPP4R2Q9NY27 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC24.12■■□□□ 1.45
PPP4R2Q9NY27 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
PPP4R2Q9NY27 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC24.12■■□□□ 1.45
PPP4R2Q9NY27 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC24.12■■□□□ 1.45
PPP4R2Q9NY27 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC24.12■■□□□ 1.45
PPP4R2Q9NY27 NFYC-AS1-201ENST00000606277 1687 ntBASIC24.12■■□□□ 1.45
PPP4R2Q9NY27 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PPP4R2Q9NY27 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
PPP4R2Q9NY27 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
PPP4R2Q9NY27 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC24.12■■□□□ 1.45
PPP4R2Q9NY27 MTMR9LP-203ENST00000426597 1545 ntBASIC24.12■■□□□ 1.45
PPP4R2Q9NY27 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC24.12■■□□□ 1.45
PPP4R2Q9NY27 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PPP4R2Q9NY27 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC24.12■■□□□ 1.45
PPP4R2Q9NY27 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC24.12■■□□□ 1.45
PPP4R2Q9NY27 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC24.12■■□□□ 1.45
PPP4R2Q9NY27 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC24.12■■□□□ 1.45
PPP4R2Q9NY27 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC24.12■■□□□ 1.45
PPP4R2Q9NY27 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
PPP4R2Q9NY27 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PPP4R2Q9NY27 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
PPP4R2Q9NY27 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC24.11■■□□□ 1.45
PPP4R2Q9NY27 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PPP4R2Q9NY27 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC24.11■■□□□ 1.45
PPP4R2Q9NY27 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC24.11■■□□□ 1.45
PPP4R2Q9NY27 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC24.11■■□□□ 1.45
PPP4R2Q9NY27 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PPP4R2Q9NY27 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
PPP4R2Q9NY27 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC24.11■■□□□ 1.45
PPP4R2Q9NY27 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
PPP4R2Q9NY27 ISCU-212ENST00000547005 795 ntTSL 3 BASIC24.11■■□□□ 1.45
PPP4R2Q9NY27 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC24.11■■□□□ 1.45
PPP4R2Q9NY27 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC24.11■■□□□ 1.45
PPP4R2Q9NY27 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC24.11■■□□□ 1.45
PPP4R2Q9NY27 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
PPP4R2Q9NY27 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC24.1■■□□□ 1.45
PPP4R2Q9NY27 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC24.1■■□□□ 1.45
PPP4R2Q9NY27 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PPP4R2Q9NY27 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PPP4R2Q9NY27 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC24.1■■□□□ 1.45
PPP4R2Q9NY27 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
PPP4R2Q9NY27 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PPP4R2Q9NY27 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PPP4R2Q9NY27 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC24.1■■□□□ 1.45
PPP4R2Q9NY27 TSPY23P-201ENST00000440136 739 ntBASIC24.1■■□□□ 1.45
PPP4R2Q9NY27 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC24.1■■□□□ 1.45
PPP4R2Q9NY27 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC24.1■■□□□ 1.45
PPP4R2Q9NY27 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms