Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
POLE3Q9NRF9 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
POLE3Q9NRF9 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.52■□□□□ 0.4
POLE3Q9NRF9 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
POLE3Q9NRF9 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
POLE3Q9NRF9 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
POLE3Q9NRF9 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
POLE3Q9NRF9 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
POLE3Q9NRF9 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
POLE3Q9NRF9 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
POLE3Q9NRF9 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
POLE3Q9NRF9 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
POLE3Q9NRF9 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.52■□□□□ 0.39
POLE3Q9NRF9 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
POLE3Q9NRF9 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.52■□□□□ 0.39
POLE3Q9NRF9 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
POLE3Q9NRF9 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
POLE3Q9NRF9 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.52■□□□□ 0.39
POLE3Q9NRF9 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.39
POLE3Q9NRF9 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
POLE3Q9NRF9 AL020996.1-203ENST00000536896 2307 ntBASIC17.52■□□□□ 0.39
POLE3Q9NRF9 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLE3Q9NRF9 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
POLE3Q9NRF9 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
POLE3Q9NRF9 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.51■□□□□ 0.39
POLE3Q9NRF9 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLE3Q9NRF9 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLE3Q9NRF9 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLE3Q9NRF9 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLE3Q9NRF9 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
POLE3Q9NRF9 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
POLE3Q9NRF9 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLE3Q9NRF9 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
POLE3Q9NRF9 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
POLE3Q9NRF9 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLE3Q9NRF9 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
POLE3Q9NRF9 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.51■□□□□ 0.39
POLE3Q9NRF9 UBE2SP1-201ENST00000450587 669 ntBASIC17.51■□□□□ 0.39
POLE3Q9NRF9 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
POLE3Q9NRF9 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.51■□□□□ 0.39
POLE3Q9NRF9 KRT8P3-201ENST00000519669 1449 ntBASIC17.51■□□□□ 0.39
POLE3Q9NRF9 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.51■□□□□ 0.39
POLE3Q9NRF9 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.51■□□□□ 0.39
POLE3Q9NRF9 AC142381.4-202ENST00000563973 229 ntBASIC17.51■□□□□ 0.39
POLE3Q9NRF9 AC011298.2-201ENST00000617989 482 ntBASIC17.51■□□□□ 0.39
POLE3Q9NRF9 AC130371.2-201ENST00000619443 611 ntBASIC17.51■□□□□ 0.39
POLE3Q9NRF9 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.51■□□□□ 0.39
POLE3Q9NRF9 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLE3Q9NRF9 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLE3Q9NRF9 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
POLE3Q9NRF9 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
POLE3Q9NRF9 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLE3Q9NRF9 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLE3Q9NRF9 FSCN1P1-201ENST00000568912 1481 ntBASIC17.5■□□□□ 0.39
POLE3Q9NRF9 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
POLE3Q9NRF9 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
POLE3Q9NRF9 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
POLE3Q9NRF9 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLE3Q9NRF9 PKD1P5-201ENST00000532415 10291 ntBASIC17.5■□□□□ 0.39
POLE3Q9NRF9 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.5■□□□□ 0.39
POLE3Q9NRF9 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
POLE3Q9NRF9 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
POLE3Q9NRF9 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.5■□□□□ 0.39
POLE3Q9NRF9 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.5■□□□□ 0.39
POLE3Q9NRF9 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
POLE3Q9NRF9 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
POLE3Q9NRF9 AP001412.1-201ENST00000608405 714 ntBASIC17.5■□□□□ 0.39
POLE3Q9NRF9 MIR6786-201ENST00000616843 113 ntBASIC17.5■□□□□ 0.39
POLE3Q9NRF9 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.5■□□□□ 0.39
POLE3Q9NRF9 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
POLE3Q9NRF9 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.5■□□□□ 0.39
POLE3Q9NRF9 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.5■□□□□ 0.39
POLE3Q9NRF9 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLE3Q9NRF9 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
POLE3Q9NRF9 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLE3Q9NRF9 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLE3Q9NRF9 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
POLE3Q9NRF9 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLE3Q9NRF9 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLE3Q9NRF9 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLE3Q9NRF9 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLE3Q9NRF9 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
POLE3Q9NRF9 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
POLE3Q9NRF9 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLE3Q9NRF9 AL512353.2-201ENST00000448759 1962 ntBASIC17.49■□□□□ 0.39
POLE3Q9NRF9 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
POLE3Q9NRF9 AC120498.9-201ENST00000339021 3867 ntBASIC17.49■□□□□ 0.39
POLE3Q9NRF9 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.49■□□□□ 0.39
POLE3Q9NRF9 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
POLE3Q9NRF9 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
POLE3Q9NRF9 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
POLE3Q9NRF9 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.49■□□□□ 0.39
POLE3Q9NRF9 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.49■□□□□ 0.39
POLE3Q9NRF9 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.49■□□□□ 0.39
POLE3Q9NRF9 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.49■□□□□ 0.39
POLE3Q9NRF9 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
POLE3Q9NRF9 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.49■□□□□ 0.39
POLE3Q9NRF9 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.49■□□□□ 0.39
POLE3Q9NRF9 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.49■□□□□ 0.39
POLE3Q9NRF9 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms