Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CTPS2Q9NRF8 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.56■□□□□ 0.4
CTPS2Q9NRF8 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTPS2Q9NRF8 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CTPS2Q9NRF8 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CTPS2Q9NRF8 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.56■□□□□ 0.4
CTPS2Q9NRF8 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTPS2Q9NRF8 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTPS2Q9NRF8 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.56■□□□□ 0.4
CTPS2Q9NRF8 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.56■□□□□ 0.4
CTPS2Q9NRF8 BCL2-203ENST00000589955 5011 ntBASIC17.56■□□□□ 0.4
CTPS2Q9NRF8 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.56■□□□□ 0.4
CTPS2Q9NRF8 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.56■□□□□ 0.4
CTPS2Q9NRF8 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CTPS2Q9NRF8 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.55■□□□□ 0.4
CTPS2Q9NRF8 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTPS2Q9NRF8 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTPS2Q9NRF8 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
CTPS2Q9NRF8 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.55■□□□□ 0.4
CTPS2Q9NRF8 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CTPS2Q9NRF8 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CTPS2Q9NRF8 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CTPS2Q9NRF8 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CTPS2Q9NRF8 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTPS2Q9NRF8 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CTPS2Q9NRF8 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTPS2Q9NRF8 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.55■□□□□ 0.4
CTPS2Q9NRF8 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTPS2Q9NRF8 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTPS2Q9NRF8 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.55■□□□□ 0.4
CTPS2Q9NRF8 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CTPS2Q9NRF8 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.55■□□□□ 0.4
CTPS2Q9NRF8 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTPS2Q9NRF8 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.55■□□□□ 0.4
CTPS2Q9NRF8 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.55■□□□□ 0.4
CTPS2Q9NRF8 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CTPS2Q9NRF8 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.55■□□□□ 0.4
CTPS2Q9NRF8 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.55■□□□□ 0.4
CTPS2Q9NRF8 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.55■□□□□ 0.4
CTPS2Q9NRF8 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CTPS2Q9NRF8 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CTPS2Q9NRF8 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CTPS2Q9NRF8 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTPS2Q9NRF8 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.55■□□□□ 0.4
CTPS2Q9NRF8 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTPS2Q9NRF8 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTPS2Q9NRF8 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CTPS2Q9NRF8 FEM1AP3-201ENST00000403722 1741 ntBASIC17.55■□□□□ 0.4
CTPS2Q9NRF8 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTPS2Q9NRF8 AL512353.2-201ENST00000448759 1962 ntBASIC17.55■□□□□ 0.4
CTPS2Q9NRF8 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTPS2Q9NRF8 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTPS2Q9NRF8 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTPS2Q9NRF8 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTPS2Q9NRF8 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CTPS2Q9NRF8 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.54■□□□□ 0.4
CTPS2Q9NRF8 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTPS2Q9NRF8 AL031598.1-201ENST00000561511 1773 ntBASIC17.54■□□□□ 0.4
CTPS2Q9NRF8 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CTPS2Q9NRF8 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.54■□□□□ 0.4
CTPS2Q9NRF8 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTPS2Q9NRF8 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTPS2Q9NRF8 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTPS2Q9NRF8 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CTPS2Q9NRF8 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CTPS2Q9NRF8 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.54■□□□□ 0.4
CTPS2Q9NRF8 AC098590.1-201ENST00000468126 897 ntBASIC17.54■□□□□ 0.4
CTPS2Q9NRF8 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.54■□□□□ 0.4
CTPS2Q9NRF8 AC142381.4-202ENST00000563973 229 ntBASIC17.54■□□□□ 0.4
CTPS2Q9NRF8 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.54■□□□□ 0.4
CTPS2Q9NRF8 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTPS2Q9NRF8 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.54■□□□□ 0.4
CTPS2Q9NRF8 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CTPS2Q9NRF8 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTPS2Q9NRF8 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTPS2Q9NRF8 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTPS2Q9NRF8 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTPS2Q9NRF8 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTPS2Q9NRF8 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.53■□□□□ 0.4
CTPS2Q9NRF8 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CTPS2Q9NRF8 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTPS2Q9NRF8 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTPS2Q9NRF8 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTPS2Q9NRF8 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTPS2Q9NRF8 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CTPS2Q9NRF8 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTPS2Q9NRF8 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CTPS2Q9NRF8 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTPS2Q9NRF8 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CTPS2Q9NRF8 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTPS2Q9NRF8 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTPS2Q9NRF8 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.53■□□□□ 0.4
CTPS2Q9NRF8 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTPS2Q9NRF8 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
CTPS2Q9NRF8 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.53■□□□□ 0.4
CTPS2Q9NRF8 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.53■□□□□ 0.4
CTPS2Q9NRF8 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.53■□□□□ 0.4
CTPS2Q9NRF8 HLA-A-209ENST00000638375 975 ntBASIC17.53■□□□□ 0.4
CTPS2Q9NRF8 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTPS2Q9NRF8 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms