Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RNF38Q9H0F5 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF38Q9H0F5 UPK3BP1-201ENST00000428678 509 ntBASIC19.54■□□□□ 0.72
RNF38Q9H0F5 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.54■□□□□ 0.72
RNF38Q9H0F5 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.54■□□□□ 0.72
RNF38Q9H0F5 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF38Q9H0F5 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.54■□□□□ 0.72
RNF38Q9H0F5 AP000550.4-202ENST00000639755 178 ntBASIC19.54■□□□□ 0.72
RNF38Q9H0F5 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF38Q9H0F5 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF38Q9H0F5 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
RNF38Q9H0F5 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF38Q9H0F5 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
RNF38Q9H0F5 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
RNF38Q9H0F5 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF38Q9H0F5 AC005332.1-201ENST00000577698 1310 ntBASIC19.53■□□□□ 0.72
RNF38Q9H0F5 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF38Q9H0F5 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF38Q9H0F5 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF38Q9H0F5 AL109659.2-201ENST00000606809 1674 ntBASIC19.53■□□□□ 0.72
RNF38Q9H0F5 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RNF38Q9H0F5 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF38Q9H0F5 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RNF38Q9H0F5 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.53■□□□□ 0.72
RNF38Q9H0F5 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.53■□□□□ 0.72
RNF38Q9H0F5 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
RNF38Q9H0F5 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.53■□□□□ 0.72
RNF38Q9H0F5 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.53■□□□□ 0.72
RNF38Q9H0F5 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
RNF38Q9H0F5 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.53■□□□□ 0.72
RNF38Q9H0F5 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF38Q9H0F5 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF38Q9H0F5 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.53■□□□□ 0.72
RNF38Q9H0F5 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.53■□□□□ 0.72
RNF38Q9H0F5 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
RNF38Q9H0F5 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
RNF38Q9H0F5 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.52■□□□□ 0.72
RNF38Q9H0F5 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.52■□□□□ 0.72
RNF38Q9H0F5 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.52■□□□□ 0.72
RNF38Q9H0F5 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.52■□□□□ 0.72
RNF38Q9H0F5 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
RNF38Q9H0F5 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF38Q9H0F5 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.52■□□□□ 0.72
RNF38Q9H0F5 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
RNF38Q9H0F5 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF38Q9H0F5 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RNF38Q9H0F5 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.52■□□□□ 0.72
RNF38Q9H0F5 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.52■□□□□ 0.72
RNF38Q9H0F5 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.52■□□□□ 0.72
RNF38Q9H0F5 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.52■□□□□ 0.72
RNF38Q9H0F5 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF38Q9H0F5 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.52■□□□□ 0.72
RNF38Q9H0F5 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.52■□□□□ 0.72
RNF38Q9H0F5 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RNF38Q9H0F5 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.52■□□□□ 0.72
RNF38Q9H0F5 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF38Q9H0F5 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
RNF38Q9H0F5 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
RNF38Q9H0F5 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RNF38Q9H0F5 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.52■□□□□ 0.71
RNF38Q9H0F5 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
RNF38Q9H0F5 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.52■□□□□ 0.71
RNF38Q9H0F5 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
RNF38Q9H0F5 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
RNF38Q9H0F5 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RNF38Q9H0F5 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF38Q9H0F5 LINC01311-201ENST00000565162 1445 ntBASIC19.51■□□□□ 0.71
RNF38Q9H0F5 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
RNF38Q9H0F5 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.51■□□□□ 0.71
RNF38Q9H0F5 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RNF38Q9H0F5 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.51■□□□□ 0.71
RNF38Q9H0F5 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.51■□□□□ 0.71
RNF38Q9H0F5 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF38Q9H0F5 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF38Q9H0F5 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.51■□□□□ 0.71
RNF38Q9H0F5 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RNF38Q9H0F5 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF38Q9H0F5 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
RNF38Q9H0F5 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RNF38Q9H0F5 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.51■□□□□ 0.71
RNF38Q9H0F5 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.51■□□□□ 0.71
RNF38Q9H0F5 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RNF38Q9H0F5 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RNF38Q9H0F5 RASA4DP-201ENST00000460726 1199 ntBASIC19.51■□□□□ 0.71
RNF38Q9H0F5 AC092597.1-201ENST00000487352 616 ntBASIC19.51■□□□□ 0.71
RNF38Q9H0F5 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.51■□□□□ 0.71
RNF38Q9H0F5 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
RNF38Q9H0F5 ZNF444P1-201ENST00000559497 298 ntBASIC19.51■□□□□ 0.71
RNF38Q9H0F5 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF38Q9H0F5 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.51■□□□□ 0.71
RNF38Q9H0F5 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.51■□□□□ 0.71
RNF38Q9H0F5 AC116407.4-201ENST00000623319 1061 ntBASIC19.51■□□□□ 0.71
RNF38Q9H0F5 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RNF38Q9H0F5 KRT8P32-201ENST00000512863 1461 ntBASIC19.51■□□□□ 0.71
RNF38Q9H0F5 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RNF38Q9H0F5 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF38Q9H0F5 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
RNF38Q9H0F5 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.51■□□□□ 0.71
RNF38Q9H0F5 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.51■□□□□ 0.71
RNF38Q9H0F5 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms