Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 SNAI3-AS1-205ENST00000568633 2096 ntBASIC22.5■■□□□ 1.19
UPF3BQ9BZI7 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
UPF3BQ9BZI7 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
UPF3BQ9BZI7 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC22.5■■□□□ 1.19
UPF3BQ9BZI7 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC22.5■■□□□ 1.19
UPF3BQ9BZI7 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC22.5■■□□□ 1.19
UPF3BQ9BZI7 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC22.5■■□□□ 1.19
UPF3BQ9BZI7 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
UPF3BQ9BZI7 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
UPF3BQ9BZI7 AP002982.1-201ENST00000492365 877 ntBASIC22.5■■□□□ 1.19
UPF3BQ9BZI7 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC22.5■■□□□ 1.19
UPF3BQ9BZI7 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
UPF3BQ9BZI7 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC22.5■■□□□ 1.19
UPF3BQ9BZI7 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC22.5■■□□□ 1.19
UPF3BQ9BZI7 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
UPF3BQ9BZI7 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
UPF3BQ9BZI7 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
UPF3BQ9BZI7 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
UPF3BQ9BZI7 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
UPF3BQ9BZI7 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
UPF3BQ9BZI7 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC22.49■■□□□ 1.19
UPF3BQ9BZI7 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
UPF3BQ9BZI7 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
UPF3BQ9BZI7 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
UPF3BQ9BZI7 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC22.49■■□□□ 1.19
UPF3BQ9BZI7 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC22.49■■□□□ 1.19
UPF3BQ9BZI7 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
UPF3BQ9BZI7 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC22.49■■□□□ 1.19
UPF3BQ9BZI7 AC131212.4-201ENST00000623606 975 ntBASIC22.49■■□□□ 1.19
UPF3BQ9BZI7 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
UPF3BQ9BZI7 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
UPF3BQ9BZI7 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
UPF3BQ9BZI7 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC22.49■■□□□ 1.19
UPF3BQ9BZI7 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
UPF3BQ9BZI7 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC22.49■■□□□ 1.19
UPF3BQ9BZI7 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC22.49■■□□□ 1.19
UPF3BQ9BZI7 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
UPF3BQ9BZI7 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
UPF3BQ9BZI7 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
UPF3BQ9BZI7 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC22.49■■□□□ 1.19
UPF3BQ9BZI7 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC22.48■■□□□ 1.19
UPF3BQ9BZI7 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
UPF3BQ9BZI7 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC22.48■■□□□ 1.19
UPF3BQ9BZI7 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC22.48■■□□□ 1.19
UPF3BQ9BZI7 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
UPF3BQ9BZI7 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
UPF3BQ9BZI7 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
UPF3BQ9BZI7 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
UPF3BQ9BZI7 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC22.48■■□□□ 1.19
UPF3BQ9BZI7 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
UPF3BQ9BZI7 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC22.48■■□□□ 1.19
UPF3BQ9BZI7 AC091390.4-202ENST00000476426 537 ntBASIC22.48■■□□□ 1.19
UPF3BQ9BZI7 GLRB-205ENST00000512619 728 ntTSL 3 BASIC22.48■■□□□ 1.19
UPF3BQ9BZI7 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC22.48■■□□□ 1.19
UPF3BQ9BZI7 RNF121-214ENST00000533380 870 ntTSL 3 BASIC22.48■■□□□ 1.19
UPF3BQ9BZI7 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC22.48■■□□□ 1.19
UPF3BQ9BZI7 AL353708.3-201ENST00000610272 989 ntBASIC22.48■■□□□ 1.19
UPF3BQ9BZI7 COMP-202ENST00000425807 2292 ntTSL 2 BASIC22.48■■□□□ 1.19
UPF3BQ9BZI7 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC22.48■■□□□ 1.19
UPF3BQ9BZI7 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC22.48■■□□□ 1.19
UPF3BQ9BZI7 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
UPF3BQ9BZI7 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
UPF3BQ9BZI7 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC22.48■■□□□ 1.19
UPF3BQ9BZI7 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
UPF3BQ9BZI7 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC22.47■■□□□ 1.19
UPF3BQ9BZI7 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
UPF3BQ9BZI7 RCC2P6-201ENST00000526625 1557 ntBASIC22.47■■□□□ 1.19
UPF3BQ9BZI7 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
UPF3BQ9BZI7 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
UPF3BQ9BZI7 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
UPF3BQ9BZI7 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
UPF3BQ9BZI7 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC22.47■■□□□ 1.19
UPF3BQ9BZI7 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
UPF3BQ9BZI7 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC22.47■■□□□ 1.19
UPF3BQ9BZI7 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
UPF3BQ9BZI7 PPP1R14BP5-201ENST00000440334 435 ntBASIC22.47■■□□□ 1.19
UPF3BQ9BZI7 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC22.47■■□□□ 1.19
UPF3BQ9BZI7 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC22.47■■□□□ 1.19
UPF3BQ9BZI7 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC22.47■■□□□ 1.19
UPF3BQ9BZI7 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
UPF3BQ9BZI7 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
UPF3BQ9BZI7 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC22.47■■□□□ 1.19
UPF3BQ9BZI7 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC22.47■■□□□ 1.19
UPF3BQ9BZI7 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
UPF3BQ9BZI7 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
UPF3BQ9BZI7 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
UPF3BQ9BZI7 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC22.46■■□□□ 1.19
UPF3BQ9BZI7 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC22.46■■□□□ 1.19
UPF3BQ9BZI7 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
UPF3BQ9BZI7 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
UPF3BQ9BZI7 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
UPF3BQ9BZI7 KSR1P1-201ENST00000446298 240 ntBASIC22.46■■□□□ 1.19
UPF3BQ9BZI7 AC008040.2-201ENST00000461049 708 ntBASIC22.46■■□□□ 1.19
UPF3BQ9BZI7 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC22.46■■□□□ 1.19
UPF3BQ9BZI7 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC22.46■■□□□ 1.19
UPF3BQ9BZI7 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC22.46■■□□□ 1.19
UPF3BQ9BZI7 AC126763.1-201ENST00000552015 2118 ntBASIC22.46■■□□□ 1.19
UPF3BQ9BZI7 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
UPF3BQ9BZI7 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
UPF3BQ9BZI7 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms