Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDCA3Q99618 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDCA3Q99618 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.63■□□□□ 0.73
CDCA3Q99618 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDCA3Q99618 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDCA3Q99618 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CDCA3Q99618 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDCA3Q99618 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.62■□□□□ 0.73
CDCA3Q99618 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDCA3Q99618 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDCA3Q99618 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDCA3Q99618 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDCA3Q99618 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDCA3Q99618 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.62■□□□□ 0.73
CDCA3Q99618 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
CDCA3Q99618 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.62■□□□□ 0.73
CDCA3Q99618 AC024563.2-201ENST00000603282 481 ntBASIC19.62■□□□□ 0.73
CDCA3Q99618 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDCA3Q99618 AL391422.3-201ENST00000603791 2761 ntBASIC19.62■□□□□ 0.73
CDCA3Q99618 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.62■□□□□ 0.73
CDCA3Q99618 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDCA3Q99618 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDCA3Q99618 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CDCA3Q99618 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.62■□□□□ 0.73
CDCA3Q99618 AC034236.2-201ENST00000606662 1610 ntBASIC19.62■□□□□ 0.73
CDCA3Q99618 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDCA3Q99618 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CDCA3Q99618 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CDCA3Q99618 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.61■□□□□ 0.73
CDCA3Q99618 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDCA3Q99618 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDCA3Q99618 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDCA3Q99618 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDCA3Q99618 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDCA3Q99618 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDCA3Q99618 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.61■□□□□ 0.73
CDCA3Q99618 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.61■□□□□ 0.73
CDCA3Q99618 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CDCA3Q99618 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.61■□□□□ 0.73
CDCA3Q99618 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.61■□□□□ 0.73
CDCA3Q99618 AC009065.1-201ENST00000564055 1225 ntBASIC19.61■□□□□ 0.73
CDCA3Q99618 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.61■□□□□ 0.73
CDCA3Q99618 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.61■□□□□ 0.73
CDCA3Q99618 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.61■□□□□ 0.73
CDCA3Q99618 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.61■□□□□ 0.73
CDCA3Q99618 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CDCA3Q99618 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.61■□□□□ 0.73
CDCA3Q99618 NSUN5P1-202ENST00000421140 1535 ntBASIC19.61■□□□□ 0.73
CDCA3Q99618 NSUN5P2-203ENST00000457352 1529 ntBASIC19.61■□□□□ 0.73
CDCA3Q99618 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDCA3Q99618 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDCA3Q99618 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDCA3Q99618 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDCA3Q99618 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
CDCA3Q99618 POM121L3P-201ENST00000419331 1163 ntBASIC19.6■□□□□ 0.73
CDCA3Q99618 TSPY12P-201ENST00000421279 868 ntBASIC19.6■□□□□ 0.73
CDCA3Q99618 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.6■□□□□ 0.73
CDCA3Q99618 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC19.6■□□□□ 0.73
CDCA3Q99618 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.6■□□□□ 0.73
CDCA3Q99618 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.6■□□□□ 0.73
CDCA3Q99618 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDCA3Q99618 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.6■□□□□ 0.73
CDCA3Q99618 AL671883.3-201ENST00000603274 991 ntBASIC19.6■□□□□ 0.73
CDCA3Q99618 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDCA3Q99618 AC099778.1-201ENST00000568593 1911 ntBASIC19.6■□□□□ 0.73
CDCA3Q99618 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.6■□□□□ 0.73
CDCA3Q99618 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDCA3Q99618 KRT89P-201ENST00000620027 1478 ntBASIC19.6■□□□□ 0.73
CDCA3Q99618 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDCA3Q99618 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDCA3Q99618 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDCA3Q99618 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDCA3Q99618 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.59■□□□□ 0.73
CDCA3Q99618 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.59■□□□□ 0.73
CDCA3Q99618 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDCA3Q99618 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDCA3Q99618 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDCA3Q99618 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.59■□□□□ 0.73
CDCA3Q99618 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.59■□□□□ 0.73
CDCA3Q99618 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
CDCA3Q99618 AP001005.1-201ENST00000571755 1248 ntBASIC19.59■□□□□ 0.73
CDCA3Q99618 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.59■□□□□ 0.73
CDCA3Q99618 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CDCA3Q99618 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.59■□□□□ 0.73
CDCA3Q99618 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDCA3Q99618 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDCA3Q99618 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDCA3Q99618 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CDCA3Q99618 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDCA3Q99618 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDCA3Q99618 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CDCA3Q99618 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDCA3Q99618 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDCA3Q99618 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDCA3Q99618 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
CDCA3Q99618 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.58■□□□□ 0.72
CDCA3Q99618 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDCA3Q99618 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.58■□□□□ 0.72
CDCA3Q99618 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.58■□□□□ 0.72
CDCA3Q99618 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms