Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
AP1S3Q96PC3 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC14.25□□□□□ -0.13
AP1S3Q96PC3 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP1S3Q96PC3 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP1S3Q96PC3 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP1S3Q96PC3 AC011270.2-201ENST00000624293 2550 ntBASIC14.25□□□□□ -0.13
AP1S3Q96PC3 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
AP1S3Q96PC3 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
AP1S3Q96PC3 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP1S3Q96PC3 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP1S3Q96PC3 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
AP1S3Q96PC3 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP1S3Q96PC3 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP1S3Q96PC3 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP1S3Q96PC3 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP1S3Q96PC3 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP1S3Q96PC3 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP1S3Q96PC3 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
AP1S3Q96PC3 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP1S3Q96PC3 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP1S3Q96PC3 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP1S3Q96PC3 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
AP1S3Q96PC3 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP1S3Q96PC3 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP1S3Q96PC3 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP1S3Q96PC3 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC14.24□□□□□ -0.13
AP1S3Q96PC3 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP1S3Q96PC3 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP1S3Q96PC3 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP1S3Q96PC3 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP1S3Q96PC3 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP1S3Q96PC3 MCRIP2P1-201ENST00000394346 511 ntBASIC14.24□□□□□ -0.13
AP1S3Q96PC3 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC14.24□□□□□ -0.13
AP1S3Q96PC3 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP1S3Q96PC3 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC14.24□□□□□ -0.13
AP1S3Q96PC3 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
AP1S3Q96PC3 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
AP1S3Q96PC3 RAB43-208ENST00000615093 783 ntTSL 5 BASIC14.24□□□□□ -0.13
AP1S3Q96PC3 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC14.24□□□□□ -0.13
AP1S3Q96PC3 AC013268.1-206ENST00000638368 961 ntBASIC14.24□□□□□ -0.13
AP1S3Q96PC3 AC112229.1-201ENST00000639295 961 ntBASIC14.24□□□□□ -0.13
AP1S3Q96PC3 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
AP1S3Q96PC3 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP1S3Q96PC3 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
AP1S3Q96PC3 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
AP1S3Q96PC3 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.24□□□□□ -0.13
AP1S3Q96PC3 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC14.24□□□□□ -0.13
AP1S3Q96PC3 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC14.24□□□□□ -0.13
AP1S3Q96PC3 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
AP1S3Q96PC3 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
AP1S3Q96PC3 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
AP1S3Q96PC3 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP1S3Q96PC3 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
AP1S3Q96PC3 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP1S3Q96PC3 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP1S3Q96PC3 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
AP1S3Q96PC3 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP1S3Q96PC3 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
AP1S3Q96PC3 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
AP1S3Q96PC3 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
AP1S3Q96PC3 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S3Q96PC3 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S3Q96PC3 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S3Q96PC3 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S3Q96PC3 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
AP1S3Q96PC3 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S3Q96PC3 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S3Q96PC3 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S3Q96PC3 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC14.23□□□□□ -0.13
AP1S3Q96PC3 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
AP1S3Q96PC3 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S3Q96PC3 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
AP1S3Q96PC3 JTB-203ENST00000368589 1216 ntTSL 2 BASIC14.23□□□□□ -0.13
AP1S3Q96PC3 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S3Q96PC3 BMP1-204ENST00000397814 836 ntTSL 4 BASIC14.23□□□□□ -0.13
AP1S3Q96PC3 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S3Q96PC3 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S3Q96PC3 AC007322.4-201ENST00000509611 723 ntBASIC14.23□□□□□ -0.13
AP1S3Q96PC3 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC14.23□□□□□ -0.13
AP1S3Q96PC3 SP2-202ENST00000613139 908 ntTSL 5 BASIC14.23□□□□□ -0.13
AP1S3Q96PC3 AC105020.6-201ENST00000621523 1217 ntBASIC14.23□□□□□ -0.13
AP1S3Q96PC3 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S3Q96PC3 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.23□□□□□ -0.13
AP1S3Q96PC3 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC14.23□□□□□ -0.13
AP1S3Q96PC3 AL390961.4-201ENST00000623958 2535 ntBASIC14.23□□□□□ -0.13
AP1S3Q96PC3 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S3Q96PC3 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S3Q96PC3 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S3Q96PC3 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S3Q96PC3 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC14.23□□□□□ -0.13
AP1S3Q96PC3 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S3Q96PC3 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S3Q96PC3 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S3Q96PC3 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S3Q96PC3 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S3Q96PC3 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
AP1S3Q96PC3 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S3Q96PC3 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
AP1S3Q96PC3 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
AP1S3Q96PC3 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms