Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
ZNF48Q96MX3 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF48Q96MX3 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF48Q96MX3 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
ZNF48Q96MX3 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF48Q96MX3 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC15.33■□□□□ 0.04
ZNF48Q96MX3 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF48Q96MX3 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF48Q96MX3 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF48Q96MX3 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF48Q96MX3 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF48Q96MX3 KRT18P56-201ENST00000507275 550 ntBASIC15.33■□□□□ 0.04
ZNF48Q96MX3 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC15.33■□□□□ 0.04
ZNF48Q96MX3 GCSHP2-201ENST00000560971 527 ntBASIC15.33■□□□□ 0.04
ZNF48Q96MX3 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC15.33■□□□□ 0.04
ZNF48Q96MX3 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
ZNF48Q96MX3 DFFB-212ENST00000625756 649 ntTSL 5 BASIC15.33■□□□□ 0.04
ZNF48Q96MX3 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF48Q96MX3 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
ZNF48Q96MX3 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF48Q96MX3 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF48Q96MX3 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF48Q96MX3 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC15.33■□□□□ 0.04
ZNF48Q96MX3 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC15.33■□□□□ 0.04
ZNF48Q96MX3 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF48Q96MX3 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF48Q96MX3 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC15.32■□□□□ 0.04
ZNF48Q96MX3 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC15.32■□□□□ 0.04
ZNF48Q96MX3 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC15.32■□□□□ 0.04
ZNF48Q96MX3 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC15.32■□□□□ 0.04
ZNF48Q96MX3 AC093484.2-201ENST00000580996 2166 ntBASIC15.32■□□□□ 0.04
ZNF48Q96MX3 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF48Q96MX3 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF48Q96MX3 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC15.32■□□□□ 0.04
ZNF48Q96MX3 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF48Q96MX3 ZNF815P-204ENST00000434898 1737 ntBASIC15.32■□□□□ 0.04
ZNF48Q96MX3 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF48Q96MX3 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF48Q96MX3 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
ZNF48Q96MX3 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC15.32■□□□□ 0.04
ZNF48Q96MX3 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF48Q96MX3 AC112907.2-201ENST00000448639 330 ntBASIC15.32■□□□□ 0.04
ZNF48Q96MX3 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
ZNF48Q96MX3 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.32■□□□□ 0.04
ZNF48Q96MX3 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC15.32■□□□□ 0.04
ZNF48Q96MX3 AC093458.2-201ENST00000623150 629 ntBASIC15.32■□□□□ 0.04
ZNF48Q96MX3 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC15.32■□□□□ 0.04
ZNF48Q96MX3 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
ZNF48Q96MX3 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF48Q96MX3 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF48Q96MX3 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC15.32■□□□□ 0.04
ZNF48Q96MX3 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF48Q96MX3 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
ZNF48Q96MX3 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF48Q96MX3 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC15.32■□□□□ 0.04
ZNF48Q96MX3 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF48Q96MX3 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF48Q96MX3 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF48Q96MX3 Z82202.1-201ENST00000623446 1880 ntBASIC15.31■□□□□ 0.04
ZNF48Q96MX3 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF48Q96MX3 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF48Q96MX3 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
ZNF48Q96MX3 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC15.31■□□□□ 0.04
ZNF48Q96MX3 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF48Q96MX3 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF48Q96MX3 PWWP2AP1-201ENST00000429776 2273 ntBASIC15.31■□□□□ 0.04
ZNF48Q96MX3 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC15.31■□□□□ 0.04
ZNF48Q96MX3 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF48Q96MX3 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF48Q96MX3 AP000523.1-201ENST00000398242 1049 ntBASIC15.31■□□□□ 0.04
ZNF48Q96MX3 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF48Q96MX3 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC15.31■□□□□ 0.04
ZNF48Q96MX3 TSPY23P-201ENST00000440136 739 ntBASIC15.31■□□□□ 0.04
ZNF48Q96MX3 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC15.31■□□□□ 0.04
ZNF48Q96MX3 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
ZNF48Q96MX3 TOLLIP-AS1-201ENST00000530897 939 ntBASIC15.31■□□□□ 0.04
ZNF48Q96MX3 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC15.31■□□□□ 0.04
ZNF48Q96MX3 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC15.31■□□□□ 0.04
ZNF48Q96MX3 NEK4P2-201ENST00000580004 1012 ntBASIC15.31■□□□□ 0.04
ZNF48Q96MX3 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.31■□□□□ 0.04
ZNF48Q96MX3 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.31■□□□□ 0.04
ZNF48Q96MX3 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.31■□□□□ 0.04
ZNF48Q96MX3 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC15.31■□□□□ 0.04
ZNF48Q96MX3 AC083849.1-201ENST00000615227 514 ntBASIC15.31■□□□□ 0.04
ZNF48Q96MX3 AC116407.4-201ENST00000623319 1061 ntBASIC15.31■□□□□ 0.04
ZNF48Q96MX3 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC15.31■□□□□ 0.04
ZNF48Q96MX3 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF48Q96MX3 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF48Q96MX3 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC15.31■□□□□ 0.04
ZNF48Q96MX3 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC15.31■□□□□ 0.04
ZNF48Q96MX3 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF48Q96MX3 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF48Q96MX3 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF48Q96MX3 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
ZNF48Q96MX3 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
ZNF48Q96MX3 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
ZNF48Q96MX3 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
ZNF48Q96MX3 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF48Q96MX3 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
ZNF48Q96MX3 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms