Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
LINC00479Q96M42 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00479Q96M42 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00479Q96M42 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00479Q96M42 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00479Q96M42 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LINC00479Q96M42 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00479Q96M42 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
LINC00479Q96M42 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.41□□□□□ -0.1
LINC00479Q96M42 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC14.41□□□□□ -0.1
LINC00479Q96M42 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00479Q96M42 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00479Q96M42 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC14.41□□□□□ -0.1
LINC00479Q96M42 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LINC00479Q96M42 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00479Q96M42 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
LINC00479Q96M42 SNAI3-AS1-205ENST00000568633 2096 ntBASIC14.4□□□□□ -0.1
LINC00479Q96M42 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00479Q96M42 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00479Q96M42 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00479Q96M42 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00479Q96M42 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00479Q96M42 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00479Q96M42 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
LINC00479Q96M42 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC14.4□□□□□ -0.1
LINC00479Q96M42 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00479Q96M42 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00479Q96M42 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC14.4□□□□□ -0.1
LINC00479Q96M42 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00479Q96M42 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00479Q96M42 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC14.4□□□□□ -0.1
LINC00479Q96M42 NME1-207ENST00000480143 964 ntTSL 2 BASIC14.4□□□□□ -0.1
LINC00479Q96M42 LGR4-203ENST00000480977 492 ntTSL 2 BASIC14.4□□□□□ -0.1
LINC00479Q96M42 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC14.4□□□□□ -0.1
LINC00479Q96M42 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00479Q96M42 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC14.4□□□□□ -0.1
LINC00479Q96M42 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00479Q96M42 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
LINC00479Q96M42 OR10C1-204ENST00000622521 1039 ntBASIC14.4□□□□□ -0.1
LINC00479Q96M42 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC14.4□□□□□ -0.1
LINC00479Q96M42 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00479Q96M42 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC14.4□□□□□ -0.1
LINC00479Q96M42 AC099398.1-201ENST00000567919 2776 ntBASIC14.4□□□□□ -0.1
LINC00479Q96M42 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00479Q96M42 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00479Q96M42 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC14.4□□□□□ -0.1
LINC00479Q96M42 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00479Q96M42 MKRN4P-201ENST00000444706 1521 ntBASIC14.4□□□□□ -0.1
LINC00479Q96M42 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00479Q96M42 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC14.4□□□□□ -0.1
LINC00479Q96M42 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC14.4□□□□□ -0.11
LINC00479Q96M42 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC14.4□□□□□ -0.11
LINC00479Q96M42 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
LINC00479Q96M42 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00479Q96M42 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
LINC00479Q96M42 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00479Q96M42 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00479Q96M42 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00479Q96M42 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00479Q96M42 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
LINC00479Q96M42 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00479Q96M42 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00479Q96M42 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00479Q96M42 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00479Q96M42 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
LINC00479Q96M42 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00479Q96M42 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00479Q96M42 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00479Q96M42 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00479Q96M42 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00479Q96M42 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00479Q96M42 GUK1-205ENST00000366722 850 ntTSL 3 BASIC14.39□□□□□ -0.11
LINC00479Q96M42 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00479Q96M42 LSM12P1-201ENST00000411836 588 ntBASIC14.39□□□□□ -0.11
LINC00479Q96M42 AL390719.1-204ENST00000412397 1219 ntBASIC14.39□□□□□ -0.11
LINC00479Q96M42 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00479Q96M42 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00479Q96M42 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC14.39□□□□□ -0.11
LINC00479Q96M42 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC14.39□□□□□ -0.11
LINC00479Q96M42 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00479Q96M42 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14.39□□□□□ -0.11
LINC00479Q96M42 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00479Q96M42 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC14.39□□□□□ -0.11
LINC00479Q96M42 AC134043.2-201ENST00000624206 2238 ntBASIC14.39□□□□□ -0.11
LINC00479Q96M42 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC14.39□□□□□ -0.11
LINC00479Q96M42 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00479Q96M42 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00479Q96M42 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00479Q96M42 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC14.39□□□□□ -0.11
LINC00479Q96M42 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00479Q96M42 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00479Q96M42 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00479Q96M42 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00479Q96M42 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00479Q96M42 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC14.38□□□□□ -0.11
LINC00479Q96M42 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
LINC00479Q96M42 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LINC00479Q96M42 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC14.38□□□□□ -0.11
LINC00479Q96M42 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
LINC00479Q96M42 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms