Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MS4A3Q96HJ5 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.06■□□□□ 0.32
MS4A3Q96HJ5 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
MS4A3Q96HJ5 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MS4A3Q96HJ5 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
MS4A3Q96HJ5 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
MS4A3Q96HJ5 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MS4A3Q96HJ5 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MS4A3Q96HJ5 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MS4A3Q96HJ5 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MS4A3Q96HJ5 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MS4A3Q96HJ5 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC17.06■□□□□ 0.32
MS4A3Q96HJ5 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
MS4A3Q96HJ5 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.06■□□□□ 0.32
MS4A3Q96HJ5 MTCYBP28-201ENST00000566728 1132 ntBASIC17.06■□□□□ 0.32
MS4A3Q96HJ5 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.06■□□□□ 0.32
MS4A3Q96HJ5 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
MS4A3Q96HJ5 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MS4A3Q96HJ5 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
MS4A3Q96HJ5 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MS4A3Q96HJ5 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
MS4A3Q96HJ5 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.06■□□□□ 0.32
MS4A3Q96HJ5 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
MS4A3Q96HJ5 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MS4A3Q96HJ5 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.06■□□□□ 0.32
MS4A3Q96HJ5 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.06■□□□□ 0.32
MS4A3Q96HJ5 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MS4A3Q96HJ5 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MS4A3Q96HJ5 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
MS4A3Q96HJ5 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MS4A3Q96HJ5 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.06■□□□□ 0.32
MS4A3Q96HJ5 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
MS4A3Q96HJ5 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
MS4A3Q96HJ5 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MS4A3Q96HJ5 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.05■□□□□ 0.32
MS4A3Q96HJ5 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.05■□□□□ 0.32
MS4A3Q96HJ5 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MS4A3Q96HJ5 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
MS4A3Q96HJ5 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MS4A3Q96HJ5 AIRN-201ENST00000601203 4374 ntBASIC17.05■□□□□ 0.32
MS4A3Q96HJ5 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MS4A3Q96HJ5 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.05■□□□□ 0.32
MS4A3Q96HJ5 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MS4A3Q96HJ5 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MS4A3Q96HJ5 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.05■□□□□ 0.32
MS4A3Q96HJ5 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MS4A3Q96HJ5 YBX1P10-201ENST00000444752 975 ntBASIC17.05■□□□□ 0.32
MS4A3Q96HJ5 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
MS4A3Q96HJ5 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.05■□□□□ 0.32
MS4A3Q96HJ5 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.05■□□□□ 0.32
MS4A3Q96HJ5 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.05■□□□□ 0.32
MS4A3Q96HJ5 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.05■□□□□ 0.32
MS4A3Q96HJ5 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.05■□□□□ 0.32
MS4A3Q96HJ5 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.05■□□□□ 0.32
MS4A3Q96HJ5 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.05■□□□□ 0.32
MS4A3Q96HJ5 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.05■□□□□ 0.32
MS4A3Q96HJ5 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
MS4A3Q96HJ5 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
MS4A3Q96HJ5 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MS4A3Q96HJ5 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MS4A3Q96HJ5 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
MS4A3Q96HJ5 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MS4A3Q96HJ5 AL138781.2-201ENST00000617896 1843 ntBASIC17.05■□□□□ 0.32
MS4A3Q96HJ5 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.05■□□□□ 0.32
MS4A3Q96HJ5 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.05■□□□□ 0.32
MS4A3Q96HJ5 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
MS4A3Q96HJ5 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MS4A3Q96HJ5 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.04■□□□□ 0.32
MS4A3Q96HJ5 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
MS4A3Q96HJ5 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.04■□□□□ 0.32
MS4A3Q96HJ5 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MS4A3Q96HJ5 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MS4A3Q96HJ5 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MS4A3Q96HJ5 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MS4A3Q96HJ5 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
MS4A3Q96HJ5 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
MS4A3Q96HJ5 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MS4A3Q96HJ5 LINC00469-201ENST00000321800 708 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MS4A3Q96HJ5 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
MS4A3Q96HJ5 AC083799.1-201ENST00000366451 910 ntBASIC17.04■□□□□ 0.32
MS4A3Q96HJ5 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
MS4A3Q96HJ5 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MS4A3Q96HJ5 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MS4A3Q96HJ5 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.04■□□□□ 0.32
MS4A3Q96HJ5 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
MS4A3Q96HJ5 AC025244.1-201ENST00000505930 469 ntTSL 3 BASIC17.04■□□□□ 0.32
MS4A3Q96HJ5 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC17.04■□□□□ 0.32
MS4A3Q96HJ5 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
MS4A3Q96HJ5 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.04■□□□□ 0.32
MS4A3Q96HJ5 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.04■□□□□ 0.32
MS4A3Q96HJ5 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC17.04■□□□□ 0.32
MS4A3Q96HJ5 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.04■□□□□ 0.32
MS4A3Q96HJ5 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MS4A3Q96HJ5 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
MS4A3Q96HJ5 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MS4A3Q96HJ5 AC104581.1-202ENST00000635932 2618 ntBASIC17.04■□□□□ 0.32
MS4A3Q96HJ5 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.04■□□□□ 0.32
MS4A3Q96HJ5 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
MS4A3Q96HJ5 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MS4A3Q96HJ5 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms