Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 ABR-217ENST00000572441 563 ntTSL 4 BASIC22.06■■□□□ 1.12
CDCA5Q96FF9 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC22.06■■□□□ 1.12
CDCA5Q96FF9 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC22.06■■□□□ 1.12
CDCA5Q96FF9 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CDCA5Q96FF9 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
CDCA5Q96FF9 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDCA5Q96FF9 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC22.06■■□□□ 1.12
CDCA5Q96FF9 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
CDCA5Q96FF9 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CDCA5Q96FF9 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC22.05■■□□□ 1.12
CDCA5Q96FF9 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CDCA5Q96FF9 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
CDCA5Q96FF9 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CDCA5Q96FF9 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CDCA5Q96FF9 ENSA-205ENST00000361532 792 ntTSL 2 BASIC22.05■■□□□ 1.12
CDCA5Q96FF9 MED22-202ENST00000371999 987 ntTSL 3 BASIC22.05■■□□□ 1.12
CDCA5Q96FF9 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
CDCA5Q96FF9 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CDCA5Q96FF9 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC22.05■■□□□ 1.12
CDCA5Q96FF9 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC22.05■■□□□ 1.12
CDCA5Q96FF9 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC22.05■■□□□ 1.12
CDCA5Q96FF9 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC22.05■■□□□ 1.12
CDCA5Q96FF9 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CDCA5Q96FF9 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC22.05■■□□□ 1.12
CDCA5Q96FF9 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
CDCA5Q96FF9 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
CDCA5Q96FF9 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC22.04■■□□□ 1.12
CDCA5Q96FF9 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC22.04■■□□□ 1.12
CDCA5Q96FF9 EMD-201ENST00000369835 966 ntTSL 3 BASIC22.04■■□□□ 1.12
CDCA5Q96FF9 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC22.04■■□□□ 1.12
CDCA5Q96FF9 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CDCA5Q96FF9 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
CDCA5Q96FF9 MINOS1P3-201ENST00000457048 203 ntBASIC22.04■■□□□ 1.12
CDCA5Q96FF9 AC106730.1-201ENST00000566722 1090 ntBASIC22.04■■□□□ 1.12
CDCA5Q96FF9 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC22.04■■□□□ 1.12
CDCA5Q96FF9 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC22.04■■□□□ 1.12
CDCA5Q96FF9 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC22.04■■□□□ 1.12
CDCA5Q96FF9 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
CDCA5Q96FF9 AL512353.2-201ENST00000448759 1962 ntBASIC22.04■■□□□ 1.12
CDCA5Q96FF9 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CDCA5Q96FF9 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
CDCA5Q96FF9 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CDCA5Q96FF9 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC22.04■■□□□ 1.12
CDCA5Q96FF9 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC22.04■■□□□ 1.12
CDCA5Q96FF9 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDCA5Q96FF9 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDCA5Q96FF9 AC243591.1-201ENST00000452967 1364 ntBASIC22.03■■□□□ 1.12
CDCA5Q96FF9 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CDCA5Q96FF9 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDCA5Q96FF9 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDCA5Q96FF9 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC22.03■■□□□ 1.12
CDCA5Q96FF9 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC22.03■■□□□ 1.12
CDCA5Q96FF9 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC22.03■■□□□ 1.12
CDCA5Q96FF9 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDCA5Q96FF9 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDCA5Q96FF9 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CDCA5Q96FF9 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC22.03■■□□□ 1.12
CDCA5Q96FF9 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CDCA5Q96FF9 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CDCA5Q96FF9 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CDCA5Q96FF9 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CDCA5Q96FF9 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC22.02■■□□□ 1.12
CDCA5Q96FF9 AF186996.4-201ENST00000467186 377 ntBASIC22.02■■□□□ 1.12
CDCA5Q96FF9 RNPS1P1-201ENST00000507437 918 ntBASIC22.02■■□□□ 1.12
CDCA5Q96FF9 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC22.02■■□□□ 1.12
CDCA5Q96FF9 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC22.02■■□□□ 1.12
CDCA5Q96FF9 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC22.02■■□□□ 1.12
CDCA5Q96FF9 AC009065.1-201ENST00000564055 1225 ntBASIC22.02■■□□□ 1.12
CDCA5Q96FF9 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC22.02■■□□□ 1.12
CDCA5Q96FF9 AC024563.2-201ENST00000603282 481 ntBASIC22.02■■□□□ 1.12
CDCA5Q96FF9 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CDCA5Q96FF9 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CDCA5Q96FF9 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CDCA5Q96FF9 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CDCA5Q96FF9 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
CDCA5Q96FF9 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
CDCA5Q96FF9 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC22.01■■□□□ 1.11
CDCA5Q96FF9 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
CDCA5Q96FF9 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC22.01■■□□□ 1.11
CDCA5Q96FF9 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CDCA5Q96FF9 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
CDCA5Q96FF9 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC22.01■■□□□ 1.11
CDCA5Q96FF9 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CDCA5Q96FF9 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
CDCA5Q96FF9 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CDCA5Q96FF9 MIR564-202ENST00000385049 94 ntBASIC22.01■■□□□ 1.11
CDCA5Q96FF9 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC22.01■■□□□ 1.11
CDCA5Q96FF9 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC22.01■■□□□ 1.11
CDCA5Q96FF9 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC22.01■■□□□ 1.11
CDCA5Q96FF9 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC22.01■■□□□ 1.11
CDCA5Q96FF9 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC22.01■■□□□ 1.11
CDCA5Q96FF9 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC22.01■■□□□ 1.11
CDCA5Q96FF9 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC22.01■■□□□ 1.11
CDCA5Q96FF9 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CDCA5Q96FF9 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CDCA5Q96FF9 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CDCA5Q96FF9 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC22.01■■□□□ 1.11
CDCA5Q96FF9 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CDCA5Q96FF9 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CDCA5Q96FF9 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms