Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CPNE4Q96A23 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CPNE4Q96A23 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CPNE4Q96A23 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CPNE4Q96A23 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CPNE4Q96A23 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC16.93■□□□□ 0.3
CPNE4Q96A23 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CPNE4Q96A23 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CPNE4Q96A23 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CPNE4Q96A23 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE4Q96A23 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.92■□□□□ 0.3
CPNE4Q96A23 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE4Q96A23 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE4Q96A23 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE4Q96A23 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
CPNE4Q96A23 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.92■□□□□ 0.3
CPNE4Q96A23 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE4Q96A23 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE4Q96A23 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE4Q96A23 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE4Q96A23 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE4Q96A23 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE4Q96A23 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.92■□□□□ 0.3
CPNE4Q96A23 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE4Q96A23 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CPNE4Q96A23 SLC25A3P1-201ENST00000443844 931 ntBASIC16.92■□□□□ 0.3
CPNE4Q96A23 ECEL1P2-202ENST00000465689 757 ntBASIC16.92■□□□□ 0.3
CPNE4Q96A23 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.92■□□□□ 0.3
CPNE4Q96A23 AP003041.3-201ENST00000527151 707 ntBASIC16.92■□□□□ 0.3
CPNE4Q96A23 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.92■□□□□ 0.3
CPNE4Q96A23 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC16.92■□□□□ 0.3
CPNE4Q96A23 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CPNE4Q96A23 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE4Q96A23 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE4Q96A23 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE4Q96A23 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE4Q96A23 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE4Q96A23 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
CPNE4Q96A23 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
CPNE4Q96A23 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE4Q96A23 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE4Q96A23 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE4Q96A23 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE4Q96A23 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE4Q96A23 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
CPNE4Q96A23 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE4Q96A23 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE4Q96A23 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC16.91■□□□□ 0.3
CPNE4Q96A23 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE4Q96A23 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.91■□□□□ 0.3
CPNE4Q96A23 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.91■□□□□ 0.3
CPNE4Q96A23 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.91■□□□□ 0.3
CPNE4Q96A23 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.91■□□□□ 0.3
CPNE4Q96A23 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE4Q96A23 FAM87A-204ENST00000613235 858 ntBASIC16.91■□□□□ 0.3
CPNE4Q96A23 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.91■□□□□ 0.3
CPNE4Q96A23 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE4Q96A23 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE4Q96A23 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE4Q96A23 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE4Q96A23 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE4Q96A23 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE4Q96A23 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE4Q96A23 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.91■□□□□ 0.3
CPNE4Q96A23 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE4Q96A23 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CPNE4Q96A23 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE4Q96A23 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE4Q96A23 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.9■□□□□ 0.3
CPNE4Q96A23 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.9■□□□□ 0.3
CPNE4Q96A23 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE4Q96A23 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE4Q96A23 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE4Q96A23 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE4Q96A23 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE4Q96A23 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE4Q96A23 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.9■□□□□ 0.3
CPNE4Q96A23 AC113347.1-201ENST00000413321 391 ntBASIC16.9■□□□□ 0.3
CPNE4Q96A23 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.9■□□□□ 0.3
CPNE4Q96A23 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.9■□□□□ 0.3
CPNE4Q96A23 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
CPNE4Q96A23 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.9■□□□□ 0.3
CPNE4Q96A23 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
CPNE4Q96A23 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.9■□□□□ 0.3
CPNE4Q96A23 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE4Q96A23 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.9■□□□□ 0.3
CPNE4Q96A23 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CPNE4Q96A23 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE4Q96A23 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.9■□□□□ 0.3
CPNE4Q96A23 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE4Q96A23 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE4Q96A23 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE4Q96A23 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE4Q96A23 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CPNE4Q96A23 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE4Q96A23 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CPNE4Q96A23 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.3
CPNE4Q96A23 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.89■□□□□ 0.29
CPNE4Q96A23 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE4Q96A23 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms