Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.01■□□□□ 0.47
SRFBP1Q8NEF9 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SRFBP1Q8NEF9 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18■□□□□ 0.47
SRFBP1Q8NEF9 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SRFBP1Q8NEF9 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SRFBP1Q8NEF9 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
SRFBP1Q8NEF9 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18■□□□□ 0.47
SRFBP1Q8NEF9 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18■□□□□ 0.47
SRFBP1Q8NEF9 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SRFBP1Q8NEF9 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18■□□□□ 0.47
SRFBP1Q8NEF9 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18■□□□□ 0.47
SRFBP1Q8NEF9 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
SRFBP1Q8NEF9 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SRFBP1Q8NEF9 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SRFBP1Q8NEF9 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SRFBP1Q8NEF9 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SRFBP1Q8NEF9 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18■□□□□ 0.47
SRFBP1Q8NEF9 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18■□□□□ 0.47
SRFBP1Q8NEF9 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18■□□□□ 0.47
SRFBP1Q8NEF9 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
SRFBP1Q8NEF9 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18■□□□□ 0.47
SRFBP1Q8NEF9 AC066615.1-201ENST00000640911 628 ntBASIC18■□□□□ 0.47
SRFBP1Q8NEF9 AC083906.6-201ENST00000641366 219 ntBASIC18■□□□□ 0.47
SRFBP1Q8NEF9 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SRFBP1Q8NEF9 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18■□□□□ 0.47
SRFBP1Q8NEF9 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18■□□□□ 0.47
SRFBP1Q8NEF9 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18■□□□□ 0.47
SRFBP1Q8NEF9 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18■□□□□ 0.47
SRFBP1Q8NEF9 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
SRFBP1Q8NEF9 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
SRFBP1Q8NEF9 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SRFBP1Q8NEF9 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.99■□□□□ 0.47
SRFBP1Q8NEF9 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SRFBP1Q8NEF9 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SRFBP1Q8NEF9 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
SRFBP1Q8NEF9 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SRFBP1Q8NEF9 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SRFBP1Q8NEF9 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.99■□□□□ 0.47
SRFBP1Q8NEF9 AC006333.2-201ENST00000607957 2099 ntBASIC17.99■□□□□ 0.47
SRFBP1Q8NEF9 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SRFBP1Q8NEF9 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SRFBP1Q8NEF9 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.99■□□□□ 0.47
SRFBP1Q8NEF9 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SRFBP1Q8NEF9 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
SRFBP1Q8NEF9 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SRFBP1Q8NEF9 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.99■□□□□ 0.47
SRFBP1Q8NEF9 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.99■□□□□ 0.47
SRFBP1Q8NEF9 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.99■□□□□ 0.47
SRFBP1Q8NEF9 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.99■□□□□ 0.47
SRFBP1Q8NEF9 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SRFBP1Q8NEF9 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.99■□□□□ 0.47
SRFBP1Q8NEF9 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SRFBP1Q8NEF9 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SRFBP1Q8NEF9 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SRFBP1Q8NEF9 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.99■□□□□ 0.47
SRFBP1Q8NEF9 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SRFBP1Q8NEF9 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SRFBP1Q8NEF9 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SRFBP1Q8NEF9 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
SRFBP1Q8NEF9 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SRFBP1Q8NEF9 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
SRFBP1Q8NEF9 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SRFBP1Q8NEF9 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SRFBP1Q8NEF9 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
SRFBP1Q8NEF9 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
SRFBP1Q8NEF9 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SRFBP1Q8NEF9 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SRFBP1Q8NEF9 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.98■□□□□ 0.47
SRFBP1Q8NEF9 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
SRFBP1Q8NEF9 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SRFBP1Q8NEF9 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SRFBP1Q8NEF9 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SRFBP1Q8NEF9 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.98■□□□□ 0.47
SRFBP1Q8NEF9 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
SRFBP1Q8NEF9 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.98■□□□□ 0.47
SRFBP1Q8NEF9 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SRFBP1Q8NEF9 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.98■□□□□ 0.47
SRFBP1Q8NEF9 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.98■□□□□ 0.47
SRFBP1Q8NEF9 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.98■□□□□ 0.47
SRFBP1Q8NEF9 FITM1-202ENST00000559294 800 ntBASIC17.98■□□□□ 0.47
SRFBP1Q8NEF9 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.98■□□□□ 0.47
SRFBP1Q8NEF9 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.98■□□□□ 0.47
SRFBP1Q8NEF9 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.98■□□□□ 0.47
SRFBP1Q8NEF9 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SRFBP1Q8NEF9 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SRFBP1Q8NEF9 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.98■□□□□ 0.47
SRFBP1Q8NEF9 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SRFBP1Q8NEF9 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SRFBP1Q8NEF9 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.98■□□□□ 0.47
SRFBP1Q8NEF9 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SRFBP1Q8NEF9 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SRFBP1Q8NEF9 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SRFBP1Q8NEF9 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.98■□□□□ 0.47
SRFBP1Q8NEF9 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
SRFBP1Q8NEF9 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.98■□□□□ 0.47
SRFBP1Q8NEF9 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.98■□□□□ 0.47
SRFBP1Q8NEF9 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.98■□□□□ 0.47
SRFBP1Q8NEF9 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SRFBP1Q8NEF9 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SRFBP1Q8NEF9 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms