Protein–RNA interactions for Protein: Q8NBN7

RDH13, Retinol dehydrogenase 13, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13Q8NBN7 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
RDH13Q8NBN7 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
RDH13Q8NBN7 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
RDH13Q8NBN7 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RDH13Q8NBN7 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RDH13Q8NBN7 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RDH13Q8NBN7 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RDH13Q8NBN7 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RDH13Q8NBN7 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RDH13Q8NBN7 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RDH13Q8NBN7 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RDH13Q8NBN7 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RDH13Q8NBN7 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RDH13Q8NBN7 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.63■□□□□ 0.89
RDH13Q8NBN7 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RDH13Q8NBN7 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
RDH13Q8NBN7 KRT8P9-201ENST00000558927 1449 ntBASIC20.62■□□□□ 0.89
RDH13Q8NBN7 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RDH13Q8NBN7 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RDH13Q8NBN7 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RDH13Q8NBN7 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RDH13Q8NBN7 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RDH13Q8NBN7 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RDH13Q8NBN7 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RDH13Q8NBN7 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RDH13Q8NBN7 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RDH13Q8NBN7 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RDH13Q8NBN7 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.62■□□□□ 0.89
RDH13Q8NBN7 FITM1-202ENST00000559294 800 ntBASIC20.62■□□□□ 0.89
RDH13Q8NBN7 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RDH13Q8NBN7 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.62■□□□□ 0.89
RDH13Q8NBN7 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RDH13Q8NBN7 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RDH13Q8NBN7 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RDH13Q8NBN7 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RDH13Q8NBN7 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RDH13Q8NBN7 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RDH13Q8NBN7 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.62■□□□□ 0.89
RDH13Q8NBN7 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.62■□□□□ 0.89
RDH13Q8NBN7 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.62■□□□□ 0.89
RDH13Q8NBN7 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RDH13Q8NBN7 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
RDH13Q8NBN7 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RDH13Q8NBN7 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RDH13Q8NBN7 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RDH13Q8NBN7 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RDH13Q8NBN7 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RDH13Q8NBN7 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RDH13Q8NBN7 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RDH13Q8NBN7 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
RDH13Q8NBN7 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
RDH13Q8NBN7 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.61■□□□□ 0.89
RDH13Q8NBN7 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RDH13Q8NBN7 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RDH13Q8NBN7 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RDH13Q8NBN7 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
RDH13Q8NBN7 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
RDH13Q8NBN7 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RDH13Q8NBN7 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.61■□□□□ 0.89
RDH13Q8NBN7 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.61■□□□□ 0.89
RDH13Q8NBN7 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RDH13Q8NBN7 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
RDH13Q8NBN7 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RDH13Q8NBN7 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RDH13Q8NBN7 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RDH13Q8NBN7 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.61■□□□□ 0.89
RDH13Q8NBN7 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RDH13Q8NBN7 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RDH13Q8NBN7 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
RDH13Q8NBN7 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RDH13Q8NBN7 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RDH13Q8NBN7 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
RDH13Q8NBN7 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RDH13Q8NBN7 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RDH13Q8NBN7 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RDH13Q8NBN7 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
RDH13Q8NBN7 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RDH13Q8NBN7 AP005242.2-201ENST00000580065 1175 ntBASIC20.6■□□□□ 0.89
RDH13Q8NBN7 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.6■□□□□ 0.89
RDH13Q8NBN7 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
RDH13Q8NBN7 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RDH13Q8NBN7 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
RDH13Q8NBN7 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
RDH13Q8NBN7 CYP2D8P-201ENST00000433633 1490 ntBASIC20.6■□□□□ 0.89
RDH13Q8NBN7 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RDH13Q8NBN7 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RDH13Q8NBN7 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
RDH13Q8NBN7 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.6■□□□□ 0.89
RDH13Q8NBN7 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
RDH13Q8NBN7 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RDH13Q8NBN7 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RDH13Q8NBN7 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RDH13Q8NBN7 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.59■□□□□ 0.89
RDH13Q8NBN7 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RDH13Q8NBN7 MMP23A-201ENST00000234610 1017 ntBASIC20.59■□□□□ 0.89
RDH13Q8NBN7 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RDH13Q8NBN7 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.59■□□□□ 0.89
RDH13Q8NBN7 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.59■□□□□ 0.89
RDH13Q8NBN7 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.59■□□□□ 0.89
RDH13Q8NBN7 AC008622.2-201ENST00000617006 1229 ntBASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms