Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC44A3Q8N4M1 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.3■□□□□ 0.68
SLC44A3Q8N4M1 AC138894.3-201ENST00000603787 634 ntBASIC19.3■□□□□ 0.68
SLC44A3Q8N4M1 AL353801.3-201ENST00000609898 542 ntBASIC19.3■□□□□ 0.68
SLC44A3Q8N4M1 IGHV3-41-201ENST00000613121 348 ntBASIC19.3■□□□□ 0.68
SLC44A3Q8N4M1 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.3■□□□□ 0.68
SLC44A3Q8N4M1 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SLC44A3Q8N4M1 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SLC44A3Q8N4M1 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SLC44A3Q8N4M1 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC44A3Q8N4M1 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SLC44A3Q8N4M1 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SLC44A3Q8N4M1 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SLC44A3Q8N4M1 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SLC44A3Q8N4M1 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC44A3Q8N4M1 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SLC44A3Q8N4M1 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SLC44A3Q8N4M1 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.29■□□□□ 0.68
SLC44A3Q8N4M1 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC44A3Q8N4M1 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC44A3Q8N4M1 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.29■□□□□ 0.68
SLC44A3Q8N4M1 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.29■□□□□ 0.68
SLC44A3Q8N4M1 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SLC44A3Q8N4M1 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC19.29■□□□□ 0.68
SLC44A3Q8N4M1 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.29■□□□□ 0.68
SLC44A3Q8N4M1 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
SLC44A3Q8N4M1 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC44A3Q8N4M1 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC44A3Q8N4M1 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SLC44A3Q8N4M1 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
SLC44A3Q8N4M1 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC44A3Q8N4M1 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.29■□□□□ 0.68
SLC44A3Q8N4M1 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
SLC44A3Q8N4M1 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SLC44A3Q8N4M1 HLA-A-201ENST00000376802 1334 ntBASIC19.28■□□□□ 0.68
SLC44A3Q8N4M1 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SLC44A3Q8N4M1 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC44A3Q8N4M1 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.28■□□□□ 0.68
SLC44A3Q8N4M1 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC44A3Q8N4M1 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC44A3Q8N4M1 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC44A3Q8N4M1 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC44A3Q8N4M1 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.28■□□□□ 0.68
SLC44A3Q8N4M1 AP003733.1-201ENST00000491725 852 ntBASIC19.28■□□□□ 0.68
SLC44A3Q8N4M1 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC44A3Q8N4M1 AC104390.1-201ENST00000555663 520 ntBASIC19.28■□□□□ 0.68
SLC44A3Q8N4M1 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.28■□□□□ 0.68
SLC44A3Q8N4M1 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.28■□□□□ 0.68
SLC44A3Q8N4M1 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC44A3Q8N4M1 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.28■□□□□ 0.68
SLC44A3Q8N4M1 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC44A3Q8N4M1 AC233702.3-201ENST00000578656 1387 ntBASIC19.28■□□□□ 0.68
SLC44A3Q8N4M1 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC44A3Q8N4M1 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SLC44A3Q8N4M1 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC44A3Q8N4M1 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.27■□□□□ 0.68
SLC44A3Q8N4M1 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.27■□□□□ 0.68
SLC44A3Q8N4M1 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SLC44A3Q8N4M1 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.27■□□□□ 0.68
SLC44A3Q8N4M1 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC44A3Q8N4M1 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC44A3Q8N4M1 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SLC44A3Q8N4M1 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
SLC44A3Q8N4M1 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC44A3Q8N4M1 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC44A3Q8N4M1 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC44A3Q8N4M1 KRT18P23-201ENST00000435622 1283 ntBASIC19.27■□□□□ 0.68
SLC44A3Q8N4M1 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.27■□□□□ 0.68
SLC44A3Q8N4M1 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.27■□□□□ 0.68
SLC44A3Q8N4M1 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.27■□□□□ 0.68
SLC44A3Q8N4M1 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.27■□□□□ 0.68
SLC44A3Q8N4M1 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.27■□□□□ 0.68
SLC44A3Q8N4M1 AC099336.1-202ENST00000602961 463 ntBASIC19.27■□□□□ 0.68
SLC44A3Q8N4M1 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SLC44A3Q8N4M1 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC44A3Q8N4M1 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC44A3Q8N4M1 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC44A3Q8N4M1 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
SLC44A3Q8N4M1 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.27■□□□□ 0.67
SLC44A3Q8N4M1 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SLC44A3Q8N4M1 SLC25A24-204ENST00000569674 2357 ntBASIC19.27■□□□□ 0.67
SLC44A3Q8N4M1 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
SLC44A3Q8N4M1 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.27■□□□□ 0.67
SLC44A3Q8N4M1 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SLC44A3Q8N4M1 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC44A3Q8N4M1 LINC00167-201ENST00000530583 1419 ntBASIC19.26■□□□□ 0.67
SLC44A3Q8N4M1 KRT8P7-201ENST00000533003 1432 ntBASIC19.26■□□□□ 0.67
SLC44A3Q8N4M1 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC44A3Q8N4M1 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC44A3Q8N4M1 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC44A3Q8N4M1 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.26■□□□□ 0.67
SLC44A3Q8N4M1 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC44A3Q8N4M1 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC44A3Q8N4M1 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC44A3Q8N4M1 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
SLC44A3Q8N4M1 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC44A3Q8N4M1 AL390719.2-201ENST00000606993 987 ntBASIC19.26■□□□□ 0.67
SLC44A3Q8N4M1 AC010240.3-201ENST00000607688 395 ntBASIC19.26■□□□□ 0.67
SLC44A3Q8N4M1 BX640515.1-201ENST00000617215 977 ntBASIC19.26■□□□□ 0.67
SLC44A3Q8N4M1 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms