Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC29.47■■■□□ 2.31
VPS8Q8N3P4 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
VPS8Q8N3P4 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
VPS8Q8N3P4 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
VPS8Q8N3P4 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
VPS8Q8N3P4 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
VPS8Q8N3P4 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC29.47■■■□□ 2.31
VPS8Q8N3P4 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC29.47■■■□□ 2.31
VPS8Q8N3P4 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC29.47■■■□□ 2.31
VPS8Q8N3P4 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC29.47■■■□□ 2.31
VPS8Q8N3P4 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
VPS8Q8N3P4 AC034236.2-201ENST00000606662 1610 ntBASIC29.47■■■□□ 2.31
VPS8Q8N3P4 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC29.47■■■□□ 2.31
VPS8Q8N3P4 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC29.47■■■□□ 2.31
VPS8Q8N3P4 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
VPS8Q8N3P4 KRT8P7-201ENST00000533003 1432 ntBASIC29.47■■■□□ 2.31
VPS8Q8N3P4 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
VPS8Q8N3P4 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC29.47■■■□□ 2.31
VPS8Q8N3P4 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC29.47■■■□□ 2.31
VPS8Q8N3P4 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
VPS8Q8N3P4 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC29.47■■■□□ 2.31
VPS8Q8N3P4 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
VPS8Q8N3P4 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC29.47■■■□□ 2.31
VPS8Q8N3P4 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC29.47■■■□□ 2.31
VPS8Q8N3P4 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC29.47■■■□□ 2.31
VPS8Q8N3P4 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC29.46■■■□□ 2.31
VPS8Q8N3P4 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
VPS8Q8N3P4 GAD2-202ENST00000376248 680 ntTSL 5 BASIC29.46■■■□□ 2.31
VPS8Q8N3P4 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
VPS8Q8N3P4 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC29.46■■■□□ 2.31
VPS8Q8N3P4 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC29.46■■■□□ 2.31
VPS8Q8N3P4 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
VPS8Q8N3P4 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
VPS8Q8N3P4 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
VPS8Q8N3P4 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC29.46■■■□□ 2.31
VPS8Q8N3P4 NAT14-202ENST00000587400 416 ntTSL 5 BASIC29.46■■■□□ 2.31
VPS8Q8N3P4 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC29.46■■■□□ 2.31
VPS8Q8N3P4 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC29.46■■■□□ 2.31
VPS8Q8N3P4 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
VPS8Q8N3P4 AL357033.4-201ENST00000617703 1807 ntBASIC29.46■■■□□ 2.31
VPS8Q8N3P4 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC29.46■■■□□ 2.31
VPS8Q8N3P4 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
VPS8Q8N3P4 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
VPS8Q8N3P4 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC29.46■■■□□ 2.31
VPS8Q8N3P4 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC29.45■■■□□ 2.31
VPS8Q8N3P4 KRT18P23-201ENST00000435622 1283 ntBASIC29.45■■■□□ 2.31
VPS8Q8N3P4 AC112907.2-201ENST00000448639 330 ntBASIC29.45■■■□□ 2.31
VPS8Q8N3P4 AL671277.2-201ENST00000458060 996 ntBASIC29.45■■■□□ 2.31
VPS8Q8N3P4 RASA4DP-201ENST00000460726 1199 ntBASIC29.45■■■□□ 2.31
VPS8Q8N3P4 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC29.45■■■□□ 2.31
VPS8Q8N3P4 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC29.45■■■□□ 2.31
VPS8Q8N3P4 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC29.45■■■□□ 2.31
VPS8Q8N3P4 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC29.45■■■□□ 2.31
VPS8Q8N3P4 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC29.45■■■□□ 2.31
VPS8Q8N3P4 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
VPS8Q8N3P4 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC29.45■■■□□ 2.3
VPS8Q8N3P4 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC29.45■■■□□ 2.3
VPS8Q8N3P4 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC29.45■■■□□ 2.3
VPS8Q8N3P4 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC29.45■■■□□ 2.3
VPS8Q8N3P4 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC29.45■■■□□ 2.3
VPS8Q8N3P4 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC29.45■■■□□ 2.3
VPS8Q8N3P4 AC104390.1-201ENST00000555663 520 ntBASIC29.45■■■□□ 2.3
VPS8Q8N3P4 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC29.45■■■□□ 2.3
VPS8Q8N3P4 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC29.45■■■□□ 2.3
VPS8Q8N3P4 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
VPS8Q8N3P4 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC29.45■■■□□ 2.3
VPS8Q8N3P4 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC29.44■■■□□ 2.3
VPS8Q8N3P4 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC29.44■■■□□ 2.3
VPS8Q8N3P4 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
VPS8Q8N3P4 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
VPS8Q8N3P4 SNAI3-AS1-205ENST00000568633 2096 ntBASIC29.44■■■□□ 2.3
VPS8Q8N3P4 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC29.44■■■□□ 2.3
VPS8Q8N3P4 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC29.44■■■□□ 2.3
VPS8Q8N3P4 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
VPS8Q8N3P4 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
VPS8Q8N3P4 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC29.44■■■□□ 2.3
VPS8Q8N3P4 BET1L-202ENST00000332865 533 ntTSL 5 BASIC29.44■■■□□ 2.3
VPS8Q8N3P4 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC29.44■■■□□ 2.3
VPS8Q8N3P4 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
VPS8Q8N3P4 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC29.44■■■□□ 2.3
VPS8Q8N3P4 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
VPS8Q8N3P4 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC29.44■■■□□ 2.3
VPS8Q8N3P4 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC29.44■■■□□ 2.3
VPS8Q8N3P4 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
VPS8Q8N3P4 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
VPS8Q8N3P4 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC29.43■■■□□ 2.3
VPS8Q8N3P4 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC29.43■■■□□ 2.3
VPS8Q8N3P4 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
VPS8Q8N3P4 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC29.43■■■□□ 2.3
VPS8Q8N3P4 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC29.43■■■□□ 2.3
VPS8Q8N3P4 KRT8P50-201ENST00000562022 1438 ntBASIC29.43■■■□□ 2.3
VPS8Q8N3P4 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
VPS8Q8N3P4 RMI2-205ENST00000576027 818 ntTSL 2 BASIC29.43■■■□□ 2.3
VPS8Q8N3P4 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC29.43■■■□□ 2.3
VPS8Q8N3P4 MIR3917-201ENST00000580971 93 ntBASIC29.43■■■□□ 2.3
VPS8Q8N3P4 AC010240.3-201ENST00000607688 395 ntBASIC29.43■■■□□ 2.3
VPS8Q8N3P4 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC29.43■■■□□ 2.3
VPS8Q8N3P4 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC29.42■■■□□ 2.3
VPS8Q8N3P4 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
VPS8Q8N3P4 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms