Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CSMD2Q7Z408 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CSMD2Q7Z408 AC007375.3-201ENST00000600936 2314 ntBASIC15.9■□□□□ 0.14
CSMD2Q7Z408 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC15.9■□□□□ 0.14
CSMD2Q7Z408 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC15.89■□□□□ 0.14
CSMD2Q7Z408 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CSMD2Q7Z408 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.89■□□□□ 0.13
CSMD2Q7Z408 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.89■□□□□ 0.13
CSMD2Q7Z408 AC034105.1-201ENST00000563488 319 ntBASIC15.89■□□□□ 0.13
CSMD2Q7Z408 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CSMD2Q7Z408 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CSMD2Q7Z408 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CSMD2Q7Z408 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC15.89■□□□□ 0.13
CSMD2Q7Z408 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC15.89■□□□□ 0.13
CSMD2Q7Z408 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC15.89■□□□□ 0.13
CSMD2Q7Z408 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC15.89■□□□□ 0.13
CSMD2Q7Z408 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CSMD2Q7Z408 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CSMD2Q7Z408 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CSMD2Q7Z408 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.89■□□□□ 0.13
CSMD2Q7Z408 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
CSMD2Q7Z408 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CSMD2Q7Z408 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CSMD2Q7Z408 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.89■□□□□ 0.13
CSMD2Q7Z408 CYMP-203ENST00000474680 1263 ntBASIC15.89■□□□□ 0.13
CSMD2Q7Z408 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.89■□□□□ 0.13
CSMD2Q7Z408 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CSMD2Q7Z408 DET1-207ENST00000564406 2315 ntTSL 2 BASIC15.89■□□□□ 0.13
CSMD2Q7Z408 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CSMD2Q7Z408 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.89■□□□□ 0.13
CSMD2Q7Z408 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC15.89■□□□□ 0.13
CSMD2Q7Z408 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.89■□□□□ 0.13
CSMD2Q7Z408 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CSMD2Q7Z408 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.89■□□□□ 0.13
CSMD2Q7Z408 AL390719.2-201ENST00000606993 987 ntBASIC15.89■□□□□ 0.13
CSMD2Q7Z408 AC027601.4-201ENST00000611259 610 ntBASIC15.89■□□□□ 0.13
CSMD2Q7Z408 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CSMD2Q7Z408 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CSMD2Q7Z408 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CSMD2Q7Z408 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CSMD2Q7Z408 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC15.88■□□□□ 0.13
CSMD2Q7Z408 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC15.88■□□□□ 0.13
CSMD2Q7Z408 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CSMD2Q7Z408 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CSMD2Q7Z408 MED15P5-201ENST00000423150 992 ntBASIC15.88■□□□□ 0.13
CSMD2Q7Z408 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
CSMD2Q7Z408 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC15.88■□□□□ 0.13
CSMD2Q7Z408 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.88■□□□□ 0.13
CSMD2Q7Z408 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
CSMD2Q7Z408 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
CSMD2Q7Z408 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CSMD2Q7Z408 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CSMD2Q7Z408 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CSMD2Q7Z408 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC15.88■□□□□ 0.13
CSMD2Q7Z408 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CSMD2Q7Z408 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CSMD2Q7Z408 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CSMD2Q7Z408 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CSMD2Q7Z408 FAM215A-202ENST00000632077 792 ntBASIC15.88■□□□□ 0.13
CSMD2Q7Z408 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CSMD2Q7Z408 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC15.88■□□□□ 0.13
CSMD2Q7Z408 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CSMD2Q7Z408 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CSMD2Q7Z408 AL137060.1-201ENST00000618151 2648 ntBASIC15.88■□□□□ 0.13
CSMD2Q7Z408 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CSMD2Q7Z408 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.88■□□□□ 0.13
CSMD2Q7Z408 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.88■□□□□ 0.13
CSMD2Q7Z408 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.88■□□□□ 0.13
CSMD2Q7Z408 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC15.88■□□□□ 0.13
CSMD2Q7Z408 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CSMD2Q7Z408 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CSMD2Q7Z408 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CSMD2Q7Z408 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.87■□□□□ 0.13
CSMD2Q7Z408 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.87■□□□□ 0.13
CSMD2Q7Z408 AC090616.6-201ENST00000582640 721 ntBASIC15.87■□□□□ 0.13
CSMD2Q7Z408 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
CSMD2Q7Z408 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CSMD2Q7Z408 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
CSMD2Q7Z408 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CSMD2Q7Z408 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CSMD2Q7Z408 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CSMD2Q7Z408 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CSMD2Q7Z408 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CSMD2Q7Z408 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.87■□□□□ 0.13
CSMD2Q7Z408 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CSMD2Q7Z408 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.87■□□□□ 0.13
CSMD2Q7Z408 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.87■□□□□ 0.13
CSMD2Q7Z408 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC15.87■□□□□ 0.13
CSMD2Q7Z408 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC15.87■□□□□ 0.13
CSMD2Q7Z408 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CSMD2Q7Z408 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CSMD2Q7Z408 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CSMD2Q7Z408 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CSMD2Q7Z408 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CSMD2Q7Z408 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CSMD2Q7Z408 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CSMD2Q7Z408 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CSMD2Q7Z408 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC15.87■□□□□ 0.13
CSMD2Q7Z408 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.87■□□□□ 0.13
CSMD2Q7Z408 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms