Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNKSR3Q6P9H4 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC20.28■□□□□ 0.84
CNKSR3Q6P9H4 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNKSR3Q6P9H4 MRPL3P1-201ENST00000400109 1033 ntBASIC20.28■□□□□ 0.84
CNKSR3Q6P9H4 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
CNKSR3Q6P9H4 MIR3180-4-201ENST00000582223 153 ntBASIC20.28■□□□□ 0.84
CNKSR3Q6P9H4 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
CNKSR3Q6P9H4 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CNKSR3Q6P9H4 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.28■□□□□ 0.84
CNKSR3Q6P9H4 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.28■□□□□ 0.84
CNKSR3Q6P9H4 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.28■□□□□ 0.84
CNKSR3Q6P9H4 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.28■□□□□ 0.84
CNKSR3Q6P9H4 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.28■□□□□ 0.84
CNKSR3Q6P9H4 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNKSR3Q6P9H4 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNKSR3Q6P9H4 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNKSR3Q6P9H4 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNKSR3Q6P9H4 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNKSR3Q6P9H4 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNKSR3Q6P9H4 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNKSR3Q6P9H4 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CNKSR3Q6P9H4 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.27■□□□□ 0.84
CNKSR3Q6P9H4 AC092667.1-201ENST00000434301 2586 ntBASIC20.27■□□□□ 0.84
CNKSR3Q6P9H4 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CNKSR3Q6P9H4 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNKSR3Q6P9H4 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNKSR3Q6P9H4 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.27■□□□□ 0.84
CNKSR3Q6P9H4 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.27■□□□□ 0.84
CNKSR3Q6P9H4 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNKSR3Q6P9H4 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.27■□□□□ 0.84
CNKSR3Q6P9H4 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC20.27■□□□□ 0.84
CNKSR3Q6P9H4 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CNKSR3Q6P9H4 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.27■□□□□ 0.84
CNKSR3Q6P9H4 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CNKSR3Q6P9H4 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.27■□□□□ 0.84
CNKSR3Q6P9H4 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CNKSR3Q6P9H4 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CNKSR3Q6P9H4 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CNKSR3Q6P9H4 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.26■□□□□ 0.83
CNKSR3Q6P9H4 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CNKSR3Q6P9H4 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNKSR3Q6P9H4 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNKSR3Q6P9H4 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CNKSR3Q6P9H4 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.26■□□□□ 0.83
CNKSR3Q6P9H4 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNKSR3Q6P9H4 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNKSR3Q6P9H4 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.26■□□□□ 0.83
CNKSR3Q6P9H4 IGHV3-47-201ENST00000425060 335 ntBASIC20.26■□□□□ 0.83
CNKSR3Q6P9H4 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CNKSR3Q6P9H4 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC20.26■□□□□ 0.83
CNKSR3Q6P9H4 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.26■□□□□ 0.83
CNKSR3Q6P9H4 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC20.26■□□□□ 0.83
CNKSR3Q6P9H4 AL592071.1-201ENST00000611956 408 ntBASIC20.26■□□□□ 0.83
CNKSR3Q6P9H4 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.26■□□□□ 0.83
CNKSR3Q6P9H4 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNKSR3Q6P9H4 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNKSR3Q6P9H4 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.26■□□□□ 0.83
CNKSR3Q6P9H4 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CNKSR3Q6P9H4 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CNKSR3Q6P9H4 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNKSR3Q6P9H4 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNKSR3Q6P9H4 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNKSR3Q6P9H4 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNKSR3Q6P9H4 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CNKSR3Q6P9H4 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNKSR3Q6P9H4 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNKSR3Q6P9H4 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNKSR3Q6P9H4 IGHGP-201ENST00000390555 1178 ntBASIC20.25■□□□□ 0.83
CNKSR3Q6P9H4 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20.25■□□□□ 0.83
CNKSR3Q6P9H4 GUSBP12-201ENST00000513727 720 ntBASIC20.25■□□□□ 0.83
CNKSR3Q6P9H4 PENK-208ENST00000523051 772 ntTSL 5 BASIC20.25■□□□□ 0.83
CNKSR3Q6P9H4 FICD-205ENST00000552758 603 ntTSL 2 BASIC20.25■□□□□ 0.83
CNKSR3Q6P9H4 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CNKSR3Q6P9H4 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.25■□□□□ 0.83
CNKSR3Q6P9H4 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.25■□□□□ 0.83
CNKSR3Q6P9H4 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNKSR3Q6P9H4 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CNKSR3Q6P9H4 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.25■□□□□ 0.83
CNKSR3Q6P9H4 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNKSR3Q6P9H4 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNKSR3Q6P9H4 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CNKSR3Q6P9H4 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.25■□□□□ 0.83
CNKSR3Q6P9H4 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNKSR3Q6P9H4 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CNKSR3Q6P9H4 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNKSR3Q6P9H4 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.25■□□□□ 0.83
CNKSR3Q6P9H4 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNKSR3Q6P9H4 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.24■□□□□ 0.83
CNKSR3Q6P9H4 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNKSR3Q6P9H4 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.24■□□□□ 0.83
CNKSR3Q6P9H4 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.24■□□□□ 0.83
CNKSR3Q6P9H4 AC034236.2-201ENST00000606662 1610 ntBASIC20.24■□□□□ 0.83
CNKSR3Q6P9H4 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNKSR3Q6P9H4 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNKSR3Q6P9H4 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.24■□□□□ 0.83
CNKSR3Q6P9H4 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC20.24■□□□□ 0.83
CNKSR3Q6P9H4 TEX21P-204ENST00000641479 1693 ntBASIC20.24■□□□□ 0.83
CNKSR3Q6P9H4 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNKSR3Q6P9H4 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNKSR3Q6P9H4 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms