Protein–RNA interactions for Protein: Q6NT89

TRNP1, TMF-regulated nuclear protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1Q6NT89 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRNP1Q6NT89 AC087499.1-201ENST00000418141 1075 ntBASIC19.62■□□□□ 0.73
TRNP1Q6NT89 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.62■□□□□ 0.73
TRNP1Q6NT89 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.62■□□□□ 0.73
TRNP1Q6NT89 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.62■□□□□ 0.73
TRNP1Q6NT89 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRNP1Q6NT89 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.62■□□□□ 0.73
TRNP1Q6NT89 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRNP1Q6NT89 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRNP1Q6NT89 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRNP1Q6NT89 AL109659.2-201ENST00000606809 1674 ntBASIC19.62■□□□□ 0.73
TRNP1Q6NT89 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.62■□□□□ 0.73
TRNP1Q6NT89 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
TRNP1Q6NT89 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRNP1Q6NT89 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRNP1Q6NT89 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
TRNP1Q6NT89 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
TRNP1Q6NT89 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
TRNP1Q6NT89 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRNP1Q6NT89 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRNP1Q6NT89 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.61■□□□□ 0.73
TRNP1Q6NT89 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRNP1Q6NT89 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.61■□□□□ 0.73
TRNP1Q6NT89 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.61■□□□□ 0.73
TRNP1Q6NT89 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRNP1Q6NT89 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
TRNP1Q6NT89 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRNP1Q6NT89 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.61■□□□□ 0.73
TRNP1Q6NT89 WIZP1-201ENST00000531444 2299 ntBASIC19.61■□□□□ 0.73
TRNP1Q6NT89 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRNP1Q6NT89 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRNP1Q6NT89 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRNP1Q6NT89 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRNP1Q6NT89 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRNP1Q6NT89 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRNP1Q6NT89 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.6■□□□□ 0.73
TRNP1Q6NT89 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.6■□□□□ 0.73
TRNP1Q6NT89 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.6■□□□□ 0.73
TRNP1Q6NT89 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.6■□□□□ 0.73
TRNP1Q6NT89 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRNP1Q6NT89 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
TRNP1Q6NT89 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRNP1Q6NT89 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.6■□□□□ 0.73
TRNP1Q6NT89 EGLN1P1-201ENST00000531623 762 ntBASIC19.6■□□□□ 0.73
TRNP1Q6NT89 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.6■□□□□ 0.73
TRNP1Q6NT89 C2orf69P3-201ENST00000565542 1120 ntBASIC19.6■□□□□ 0.73
TRNP1Q6NT89 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRNP1Q6NT89 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.6■□□□□ 0.73
TRNP1Q6NT89 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRNP1Q6NT89 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRNP1Q6NT89 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRNP1Q6NT89 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRNP1Q6NT89 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
TRNP1Q6NT89 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.59■□□□□ 0.73
TRNP1Q6NT89 AC104581.1-202ENST00000635932 2618 ntBASIC19.59■□□□□ 0.73
TRNP1Q6NT89 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRNP1Q6NT89 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRNP1Q6NT89 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
TRNP1Q6NT89 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRNP1Q6NT89 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.59■□□□□ 0.73
TRNP1Q6NT89 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRNP1Q6NT89 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
TRNP1Q6NT89 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRNP1Q6NT89 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRNP1Q6NT89 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRNP1Q6NT89 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRNP1Q6NT89 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRNP1Q6NT89 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
TRNP1Q6NT89 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.59■□□□□ 0.73
TRNP1Q6NT89 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRNP1Q6NT89 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRNP1Q6NT89 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
TRNP1Q6NT89 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.59■□□□□ 0.73
TRNP1Q6NT89 NAPSB-206ENST00000562112 1266 ntBASIC19.59■□□□□ 0.73
TRNP1Q6NT89 FAM87A-204ENST00000613235 858 ntBASIC19.59■□□□□ 0.73
TRNP1Q6NT89 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRNP1Q6NT89 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRNP1Q6NT89 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.59■□□□□ 0.73
TRNP1Q6NT89 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.59■□□□□ 0.73
TRNP1Q6NT89 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.59■□□□□ 0.73
TRNP1Q6NT89 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.59■□□□□ 0.73
TRNP1Q6NT89 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.59■□□□□ 0.73
TRNP1Q6NT89 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRNP1Q6NT89 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRNP1Q6NT89 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.59■□□□□ 0.73
TRNP1Q6NT89 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.59■□□□□ 0.73
TRNP1Q6NT89 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRNP1Q6NT89 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.58■□□□□ 0.73
TRNP1Q6NT89 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
TRNP1Q6NT89 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRNP1Q6NT89 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRNP1Q6NT89 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.58■□□□□ 0.73
TRNP1Q6NT89 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TRNP1Q6NT89 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRNP1Q6NT89 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TRNP1Q6NT89 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRNP1Q6NT89 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRNP1Q6NT89 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.58■□□□□ 0.72
TRNP1Q6NT89 TSPY17P-201ENST00000450329 467 ntBASIC19.58■□□□□ 0.72
TRNP1Q6NT89 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms