Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 USP39-202ENST00000409025 1946 ntTSL 5 BASIC21.43■■□□□ 1.02
PPP4R3AQ6IN85 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
PPP4R3AQ6IN85 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.43■■□□□ 1.02
PPP4R3AQ6IN85 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
PPP4R3AQ6IN85 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PPP4R3AQ6IN85 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PPP4R3AQ6IN85 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PPP4R3AQ6IN85 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PPP4R3AQ6IN85 INGX-201ENST00000359239 846 ntBASIC21.42■■□□□ 1.02
PPP4R3AQ6IN85 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PPP4R3AQ6IN85 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PPP4R3AQ6IN85 BUB3-202ENST00000368859 667 ntTSL 3 BASIC21.42■■□□□ 1.02
PPP4R3AQ6IN85 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC21.42■■□□□ 1.02
PPP4R3AQ6IN85 KRT8P32-201ENST00000512863 1461 ntBASIC21.42■■□□□ 1.02
PPP4R3AQ6IN85 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC21.42■■□□□ 1.02
PPP4R3AQ6IN85 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21.42■■□□□ 1.02
PPP4R3AQ6IN85 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
PPP4R3AQ6IN85 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC21.42■■□□□ 1.02
PPP4R3AQ6IN85 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC21.42■■□□□ 1.02
PPP4R3AQ6IN85 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC21.42■■□□□ 1.02
PPP4R3AQ6IN85 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PPP4R3AQ6IN85 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC21.42■■□□□ 1.02
PPP4R3AQ6IN85 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PPP4R3AQ6IN85 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PPP4R3AQ6IN85 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PPP4R3AQ6IN85 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PPP4R3AQ6IN85 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
PPP4R3AQ6IN85 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
PPP4R3AQ6IN85 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC21.41■■□□□ 1.02
PPP4R3AQ6IN85 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC21.41■■□□□ 1.02
PPP4R3AQ6IN85 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PPP4R3AQ6IN85 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PPP4R3AQ6IN85 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PPP4R3AQ6IN85 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PPP4R3AQ6IN85 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PPP4R3AQ6IN85 LINC01568-207ENST00000641790 1380 ntBASIC21.41■■□□□ 1.02
PPP4R3AQ6IN85 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
PPP4R3AQ6IN85 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC21.41■■□□□ 1.02
PPP4R3AQ6IN85 AC128688.1-201ENST00000487626 519 ntBASIC21.41■■□□□ 1.02
PPP4R3AQ6IN85 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.41■■□□□ 1.02
PPP4R3AQ6IN85 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PPP4R3AQ6IN85 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PPP4R3AQ6IN85 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
PPP4R3AQ6IN85 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC21.41■■□□□ 1.02
PPP4R3AQ6IN85 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PPP4R3AQ6IN85 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PPP4R3AQ6IN85 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC21.41■■□□□ 1.02
PPP4R3AQ6IN85 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21.41■■□□□ 1.02
PPP4R3AQ6IN85 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PPP4R3AQ6IN85 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PPP4R3AQ6IN85 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PPP4R3AQ6IN85 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC21.4■■□□□ 1.02
PPP4R3AQ6IN85 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
PPP4R3AQ6IN85 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
PPP4R3AQ6IN85 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PPP4R3AQ6IN85 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC21.4■■□□□ 1.02
PPP4R3AQ6IN85 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC21.4■■□□□ 1.02
PPP4R3AQ6IN85 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC21.4■■□□□ 1.02
PPP4R3AQ6IN85 AP003041.3-201ENST00000527151 707 ntBASIC21.4■■□□□ 1.02
PPP4R3AQ6IN85 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC21.4■■□□□ 1.02
PPP4R3AQ6IN85 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC21.4■■□□□ 1.02
PPP4R3AQ6IN85 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PPP4R3AQ6IN85 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC21.4■■□□□ 1.02
PPP4R3AQ6IN85 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PPP4R3AQ6IN85 AC006333.2-201ENST00000607957 2099 ntBASIC21.4■■□□□ 1.02
PPP4R3AQ6IN85 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PPP4R3AQ6IN85 AC018445.3-201ENST00000624177 1945 ntBASIC21.39■■□□□ 1.02
PPP4R3AQ6IN85 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.02
PPP4R3AQ6IN85 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
PPP4R3AQ6IN85 AL020996.1-203ENST00000536896 2307 ntBASIC21.39■■□□□ 1.02
PPP4R3AQ6IN85 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC21.39■■□□□ 1.02
PPP4R3AQ6IN85 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC21.39■■□□□ 1.02
PPP4R3AQ6IN85 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PPP4R3AQ6IN85 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC21.39■■□□□ 1.01
PPP4R3AQ6IN85 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC21.39■■□□□ 1.01
PPP4R3AQ6IN85 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC21.39■■□□□ 1.01
PPP4R3AQ6IN85 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC21.39■■□□□ 1.01
PPP4R3AQ6IN85 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
PPP4R3AQ6IN85 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC21.39■■□□□ 1.01
PPP4R3AQ6IN85 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC21.39■■□□□ 1.01
PPP4R3AQ6IN85 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.39■■□□□ 1.01
PPP4R3AQ6IN85 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC21.39■■□□□ 1.01
PPP4R3AQ6IN85 AC133561.5-201ENST00000635547 218 ntBASIC21.39■■□□□ 1.01
PPP4R3AQ6IN85 AC083906.6-201ENST00000641366 219 ntBASIC21.39■■□□□ 1.01
PPP4R3AQ6IN85 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PPP4R3AQ6IN85 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.39■■□□□ 1.01
PPP4R3AQ6IN85 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC21.39■■□□□ 1.01
PPP4R3AQ6IN85 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PPP4R3AQ6IN85 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
PPP4R3AQ6IN85 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
PPP4R3AQ6IN85 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
PPP4R3AQ6IN85 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PPP4R3AQ6IN85 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC21.39■■□□□ 1.01
PPP4R3AQ6IN85 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC21.39■■□□□ 1.01
PPP4R3AQ6IN85 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PPP4R3AQ6IN85 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PPP4R3AQ6IN85 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC21.38■■□□□ 1.01
PPP4R3AQ6IN85 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
PPP4R3AQ6IN85 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
PPP4R3AQ6IN85 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms