Protein–RNA interactions for Protein: Q5SZB4

C9orf50, Uncharacterized protein C9orf50, humanhuman

Predictions only

Length 431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf50Q5SZB4 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
C9orf50Q5SZB4 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.19■□□□□ 0.82
C9orf50Q5SZB4 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
C9orf50Q5SZB4 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.19■□□□□ 0.82
C9orf50Q5SZB4 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
C9orf50Q5SZB4 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.19■□□□□ 0.82
C9orf50Q5SZB4 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC20.19■□□□□ 0.82
C9orf50Q5SZB4 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
C9orf50Q5SZB4 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
C9orf50Q5SZB4 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.19■□□□□ 0.82
C9orf50Q5SZB4 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.19■□□□□ 0.82
C9orf50Q5SZB4 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.19■□□□□ 0.82
C9orf50Q5SZB4 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
C9orf50Q5SZB4 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
C9orf50Q5SZB4 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.19■□□□□ 0.82
C9orf50Q5SZB4 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
C9orf50Q5SZB4 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
C9orf50Q5SZB4 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
C9orf50Q5SZB4 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
C9orf50Q5SZB4 KRT8P7-201ENST00000533003 1432 ntBASIC20.19■□□□□ 0.82
C9orf50Q5SZB4 HOXB1-202ENST00000577092 1414 ntBASIC20.19■□□□□ 0.82
C9orf50Q5SZB4 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
C9orf50Q5SZB4 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
C9orf50Q5SZB4 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.18■□□□□ 0.82
C9orf50Q5SZB4 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
C9orf50Q5SZB4 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
C9orf50Q5SZB4 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
C9orf50Q5SZB4 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
C9orf50Q5SZB4 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.18■□□□□ 0.82
C9orf50Q5SZB4 FIS1-203ENST00000442303 631 ntTSL 3 BASIC20.18■□□□□ 0.82
C9orf50Q5SZB4 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
C9orf50Q5SZB4 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.18■□□□□ 0.82
C9orf50Q5SZB4 AC027601.4-201ENST00000611259 610 ntBASIC20.18■□□□□ 0.82
C9orf50Q5SZB4 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
C9orf50Q5SZB4 AC008556.1-201ENST00000610908 2040 ntBASIC20.18■□□□□ 0.82
C9orf50Q5SZB4 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
C9orf50Q5SZB4 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
C9orf50Q5SZB4 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
C9orf50Q5SZB4 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
C9orf50Q5SZB4 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
C9orf50Q5SZB4 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
C9orf50Q5SZB4 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
C9orf50Q5SZB4 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
C9orf50Q5SZB4 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
C9orf50Q5SZB4 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
C9orf50Q5SZB4 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
C9orf50Q5SZB4 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
C9orf50Q5SZB4 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.17■□□□□ 0.82
C9orf50Q5SZB4 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
C9orf50Q5SZB4 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
C9orf50Q5SZB4 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
C9orf50Q5SZB4 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
C9orf50Q5SZB4 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
C9orf50Q5SZB4 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
C9orf50Q5SZB4 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.17■□□□□ 0.82
C9orf50Q5SZB4 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
C9orf50Q5SZB4 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC20.17■□□□□ 0.82
C9orf50Q5SZB4 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC20.17■□□□□ 0.82
C9orf50Q5SZB4 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
C9orf50Q5SZB4 AC112482.1-201ENST00000492080 688 ntBASIC20.17■□□□□ 0.82
C9orf50Q5SZB4 NMU-202ENST00000505262 693 ntTSL 3 BASIC20.17■□□□□ 0.82
C9orf50Q5SZB4 AC096582.2-201ENST00000510860 516 ntBASIC20.17■□□□□ 0.82
C9orf50Q5SZB4 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
C9orf50Q5SZB4 DHDH-204ENST00000523250 634 ntTSL 5 BASIC20.17■□□□□ 0.82
C9orf50Q5SZB4 AC145285.3-201ENST00000564603 959 ntBASIC20.17■□□□□ 0.82
C9orf50Q5SZB4 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
C9orf50Q5SZB4 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
C9orf50Q5SZB4 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
C9orf50Q5SZB4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.17■□□□□ 0.82
C9orf50Q5SZB4 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
C9orf50Q5SZB4 AL353692.3-201ENST00000407031 1396 ntBASIC20.17■□□□□ 0.82
C9orf50Q5SZB4 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.17■□□□□ 0.82
C9orf50Q5SZB4 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.17■□□□□ 0.82
C9orf50Q5SZB4 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
C9orf50Q5SZB4 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
C9orf50Q5SZB4 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
C9orf50Q5SZB4 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.16■□□□□ 0.82
C9orf50Q5SZB4 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
C9orf50Q5SZB4 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
C9orf50Q5SZB4 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
C9orf50Q5SZB4 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
C9orf50Q5SZB4 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
C9orf50Q5SZB4 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.16■□□□□ 0.82
C9orf50Q5SZB4 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
C9orf50Q5SZB4 MED15P5-201ENST00000423150 992 ntBASIC20.16■□□□□ 0.82
C9orf50Q5SZB4 FGFR3P6-201ENST00000457012 610 ntBASIC20.16■□□□□ 0.82
C9orf50Q5SZB4 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.16■□□□□ 0.82
C9orf50Q5SZB4 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.16■□□□□ 0.82
C9orf50Q5SZB4 AC024563.2-201ENST00000603282 481 ntBASIC20.16■□□□□ 0.82
C9orf50Q5SZB4 AL355877.3-201ENST00000622820 899 ntBASIC20.16■□□□□ 0.82
C9orf50Q5SZB4 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
C9orf50Q5SZB4 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
C9orf50Q5SZB4 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
C9orf50Q5SZB4 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.16■□□□□ 0.82
C9orf50Q5SZB4 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
C9orf50Q5SZB4 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
C9orf50Q5SZB4 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
C9orf50Q5SZB4 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
C9orf50Q5SZB4 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
C9orf50Q5SZB4 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms