Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
HMGA2P52926 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGA2P52926 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.23■□□□□ 0.35
HMGA2P52926 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HMGA2P52926 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
HMGA2P52926 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGA2P52926 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HMGA2P52926 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.23■□□□□ 0.35
HMGA2P52926 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGA2P52926 ESPNP-201ENST00000270691 2015 ntBASIC17.23■□□□□ 0.35
HMGA2P52926 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.23■□□□□ 0.35
HMGA2P52926 AC112777.1-201ENST00000540175 1423 ntBASIC17.23■□□□□ 0.35
HMGA2P52926 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGA2P52926 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGA2P52926 AC135776.1-201ENST00000319817 2481 ntBASIC17.23■□□□□ 0.35
HMGA2P52926 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGA2P52926 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HMGA2P52926 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
HMGA2P52926 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGA2P52926 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HMGA2P52926 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGA2P52926 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.23■□□□□ 0.35
HMGA2P52926 POM121L13P-201ENST00000422362 380 ntBASIC17.23■□□□□ 0.35
HMGA2P52926 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
HMGA2P52926 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.23■□□□□ 0.35
HMGA2P52926 PRKY-204ENST00000533551 1019 ntBASIC17.23■□□□□ 0.35
HMGA2P52926 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
HMGA2P52926 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.23■□□□□ 0.35
HMGA2P52926 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGA2P52926 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HMGA2P52926 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.23■□□□□ 0.35
HMGA2P52926 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.23■□□□□ 0.35
HMGA2P52926 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.23■□□□□ 0.35
HMGA2P52926 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGA2P52926 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGA2P52926 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HMGA2P52926 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.23■□□□□ 0.35
HMGA2P52926 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGA2P52926 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGA2P52926 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMGA2P52926 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.22■□□□□ 0.35
HMGA2P52926 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
HMGA2P52926 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMGA2P52926 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMGA2P52926 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.22■□□□□ 0.35
HMGA2P52926 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
HMGA2P52926 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
HMGA2P52926 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.22■□□□□ 0.35
HMGA2P52926 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HMGA2P52926 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.22■□□□□ 0.35
HMGA2P52926 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
HMGA2P52926 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.22■□□□□ 0.35
HMGA2P52926 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.22■□□□□ 0.35
HMGA2P52926 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HMGA2P52926 AC004264.1-201ENST00000608354 794 ntBASIC17.22■□□□□ 0.35
HMGA2P52926 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.22■□□□□ 0.35
HMGA2P52926 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMGA2P52926 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HMGA2P52926 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.22■□□□□ 0.35
HMGA2P52926 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMGA2P52926 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMGA2P52926 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HMGA2P52926 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMGA2P52926 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
HMGA2P52926 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMGA2P52926 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMGA2P52926 KRT8P45-201ENST00000414328 1447 ntBASIC17.21■□□□□ 0.35
HMGA2P52926 KRT8P3-201ENST00000519669 1449 ntBASIC17.21■□□□□ 0.35
HMGA2P52926 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HMGA2P52926 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
HMGA2P52926 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMGA2P52926 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.21■□□□□ 0.35
HMGA2P52926 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.21■□□□□ 0.35
HMGA2P52926 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
HMGA2P52926 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMGA2P52926 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.21■□□□□ 0.35
HMGA2P52926 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HMGA2P52926 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
HMGA2P52926 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMGA2P52926 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
HMGA2P52926 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMGA2P52926 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMGA2P52926 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMGA2P52926 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMGA2P52926 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMGA2P52926 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.21■□□□□ 0.35
HMGA2P52926 Z85996.1-201ENST00000494644 937 ntBASIC17.21■□□□□ 0.35
HMGA2P52926 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.21■□□□□ 0.35
HMGA2P52926 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMGA2P52926 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HMGA2P52926 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HMGA2P52926 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
HMGA2P52926 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMGA2P52926 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HMGA2P52926 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HMGA2P52926 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
HMGA2P52926 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
HMGA2P52926 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.21■□□□□ 0.34
HMGA2P52926 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.2■□□□□ 0.34
HMGA2P52926 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms