Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 FAM215A-202ENST00000632077 792 ntBASIC20.52■□□□□ 0.88
SYN1P17600 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SYN1P17600 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SYN1P17600 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SYN1P17600 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.52■□□□□ 0.88
SYN1P17600 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
SYN1P17600 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
SYN1P17600 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SYN1P17600 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
SYN1P17600 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.52■□□□□ 0.87
SYN1P17600 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
SYN1P17600 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
SYN1P17600 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SYN1P17600 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
SYN1P17600 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SYN1P17600 AC104417.2-201ENST00000562989 1793 ntBASIC20.51■□□□□ 0.87
SYN1P17600 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.51■□□□□ 0.87
SYN1P17600 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SYN1P17600 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
SYN1P17600 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SYN1P17600 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SYN1P17600 RPSAP43-201ENST00000402237 625 ntBASIC20.51■□□□□ 0.87
SYN1P17600 HNRNPA1P28-201ENST00000424481 961 ntBASIC20.51■□□□□ 0.87
SYN1P17600 KRT18P23-201ENST00000435622 1283 ntBASIC20.51■□□□□ 0.87
SYN1P17600 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC20.51■□□□□ 0.87
SYN1P17600 CFL1-212ENST00000531413 636 ntTSL 3 BASIC20.51■□□□□ 0.87
SYN1P17600 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC20.51■□□□□ 0.87
SYN1P17600 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.51■□□□□ 0.87
SYN1P17600 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
SYN1P17600 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SYN1P17600 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SYN1P17600 AP005212.1-201ENST00000581547 1997 ntBASIC20.51■□□□□ 0.87
SYN1P17600 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.51■□□□□ 0.87
SYN1P17600 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SYN1P17600 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SYN1P17600 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SYN1P17600 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SYN1P17600 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SYN1P17600 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
SYN1P17600 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.5■□□□□ 0.87
SYN1P17600 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SYN1P17600 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SYN1P17600 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SYN1P17600 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.5■□□□□ 0.87
SYN1P17600 IGHGP-201ENST00000390555 1178 ntBASIC20.5■□□□□ 0.87
SYN1P17600 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.5■□□□□ 0.87
SYN1P17600 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC20.5■□□□□ 0.87
SYN1P17600 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.5■□□□□ 0.87
SYN1P17600 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC20.5■□□□□ 0.87
SYN1P17600 SCARNA2-201ENST00000458748 420 ntBASIC20.5■□□□□ 0.87
SYN1P17600 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.5■□□□□ 0.87
SYN1P17600 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.5■□□□□ 0.87
SYN1P17600 AL356488.2-201ENST00000602755 427 ntBASIC20.5■□□□□ 0.87
SYN1P17600 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC20.5■□□□□ 0.87
SYN1P17600 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.5■□□□□ 0.87
SYN1P17600 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.5■□□□□ 0.87
SYN1P17600 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.5■□□□□ 0.87
SYN1P17600 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SYN1P17600 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.49■□□□□ 0.87
SYN1P17600 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SYN1P17600 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SYN1P17600 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SYN1P17600 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.49■□□□□ 0.87
SYN1P17600 HNRNPDP1-201ENST00000439535 754 ntBASIC20.49■□□□□ 0.87
SYN1P17600 DHDH-204ENST00000523250 634 ntTSL 5 BASIC20.49■□□□□ 0.87
SYN1P17600 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.49■□□□□ 0.87
SYN1P17600 MIR5100-201ENST00000579544 119 ntBASIC20.49■□□□□ 0.87
SYN1P17600 AC104109.2-201ENST00000602919 1418 ntBASIC20.49■□□□□ 0.87
SYN1P17600 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
SYN1P17600 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SYN1P17600 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
SYN1P17600 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.49■□□□□ 0.87
SYN1P17600 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
SYN1P17600 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.49■□□□□ 0.87
SYN1P17600 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SYN1P17600 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SYN1P17600 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SYN1P17600 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SYN1P17600 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SYN1P17600 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SYN1P17600 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SYN1P17600 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SYN1P17600 GPX1P2-201ENST00000429271 606 ntBASIC20.48■□□□□ 0.87
SYN1P17600 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.48■□□□□ 0.87
SYN1P17600 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC20.48■□□□□ 0.87
SYN1P17600 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
SYN1P17600 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SYN1P17600 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SYN1P17600 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
SYN1P17600 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.48■□□□□ 0.87
SYN1P17600 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SYN1P17600 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
SYN1P17600 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SYN1P17600 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SYN1P17600 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SYN1P17600 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SYN1P17600 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SYN1P17600 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
SYN1P17600 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SYN1P17600 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms