Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.8■□□□□ 0.76
PDGFRAP16234 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.8■□□□□ 0.76
PDGFRAP16234 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PDGFRAP16234 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDGFRAP16234 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PDGFRAP16234 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
PDGFRAP16234 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDGFRAP16234 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.8■□□□□ 0.76
PDGFRAP16234 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.8■□□□□ 0.76
PDGFRAP16234 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
PDGFRAP16234 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
PDGFRAP16234 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
PDGFRAP16234 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDGFRAP16234 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PDGFRAP16234 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDGFRAP16234 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PDGFRAP16234 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.79■□□□□ 0.76
PDGFRAP16234 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDGFRAP16234 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDGFRAP16234 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDGFRAP16234 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDGFRAP16234 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDGFRAP16234 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PDGFRAP16234 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDGFRAP16234 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PDGFRAP16234 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.79■□□□□ 0.76
PDGFRAP16234 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDGFRAP16234 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDGFRAP16234 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.79■□□□□ 0.76
PDGFRAP16234 AC083906.6-201ENST00000641366 219 ntBASIC19.79■□□□□ 0.76
PDGFRAP16234 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PDGFRAP16234 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PDGFRAP16234 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
PDGFRAP16234 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
PDGFRAP16234 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
PDGFRAP16234 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
PDGFRAP16234 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDGFRAP16234 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
PDGFRAP16234 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
PDGFRAP16234 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDGFRAP16234 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDGFRAP16234 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.78■□□□□ 0.76
PDGFRAP16234 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PDGFRAP16234 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PDGFRAP16234 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
PDGFRAP16234 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDGFRAP16234 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PDGFRAP16234 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDGFRAP16234 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDGFRAP16234 MMP23A-201ENST00000234610 1017 ntBASIC19.78■□□□□ 0.76
PDGFRAP16234 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.78■□□□□ 0.76
PDGFRAP16234 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDGFRAP16234 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.78■□□□□ 0.76
PDGFRAP16234 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.78■□□□□ 0.76
PDGFRAP16234 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
PDGFRAP16234 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
PDGFRAP16234 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PDGFRAP16234 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDGFRAP16234 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.78■□□□□ 0.76
PDGFRAP16234 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.78■□□□□ 0.76
PDGFRAP16234 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.78■□□□□ 0.76
PDGFRAP16234 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PDGFRAP16234 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PDGFRAP16234 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDGFRAP16234 KRT8P9-201ENST00000558927 1449 ntBASIC19.77■□□□□ 0.76
PDGFRAP16234 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.77■□□□□ 0.76
PDGFRAP16234 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.77■□□□□ 0.76
PDGFRAP16234 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.77■□□□□ 0.76
PDGFRAP16234 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDGFRAP16234 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDGFRAP16234 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
PDGFRAP16234 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDGFRAP16234 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PDGFRAP16234 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDGFRAP16234 ECEL1P3-201ENST00000427961 737 ntBASIC19.77■□□□□ 0.76
PDGFRAP16234 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.77■□□□□ 0.76
PDGFRAP16234 AC133561.5-201ENST00000635547 218 ntBASIC19.77■□□□□ 0.76
PDGFRAP16234 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.77■□□□□ 0.76
PDGFRAP16234 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDGFRAP16234 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PDGFRAP16234 AL020996.1-203ENST00000536896 2307 ntBASIC19.77■□□□□ 0.76
PDGFRAP16234 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDGFRAP16234 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDGFRAP16234 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDGFRAP16234 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PDGFRAP16234 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
PDGFRAP16234 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
PDGFRAP16234 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDGFRAP16234 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
PDGFRAP16234 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
PDGFRAP16234 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDGFRAP16234 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.76■□□□□ 0.75
PDGFRAP16234 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PDGFRAP16234 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.76■□□□□ 0.75
PDGFRAP16234 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
PDGFRAP16234 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDGFRAP16234 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDGFRAP16234 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDGFRAP16234 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PDGFRAP16234 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms