Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC23.08■■□□□ 1.29
COL11A2P13942 AC092667.1-201ENST00000434301 2586 ntBASIC23.08■■□□□ 1.29
COL11A2P13942 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
COL11A2P13942 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC23.08■■□□□ 1.29
COL11A2P13942 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC23.08■■□□□ 1.29
COL11A2P13942 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
COL11A2P13942 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
COL11A2P13942 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
COL11A2P13942 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC23.08■■□□□ 1.28
COL11A2P13942 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC23.08■■□□□ 1.28
COL11A2P13942 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC23.08■■□□□ 1.28
COL11A2P13942 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC23.08■■□□□ 1.28
COL11A2P13942 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC23.07■■□□□ 1.28
COL11A2P13942 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
COL11A2P13942 Z82202.1-201ENST00000623446 1880 ntBASIC23.07■■□□□ 1.28
COL11A2P13942 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
COL11A2P13942 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC23.07■■□□□ 1.28
COL11A2P13942 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
COL11A2P13942 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC23.07■■□□□ 1.28
COL11A2P13942 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
COL11A2P13942 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
COL11A2P13942 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC23.07■■□□□ 1.28
COL11A2P13942 AC124864.1-201ENST00000623408 392 ntBASIC23.07■■□□□ 1.28
COL11A2P13942 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
COL11A2P13942 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC23.07■■□□□ 1.28
COL11A2P13942 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
COL11A2P13942 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
COL11A2P13942 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
COL11A2P13942 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC23.06■■□□□ 1.28
COL11A2P13942 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
COL11A2P13942 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
COL11A2P13942 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
COL11A2P13942 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
COL11A2P13942 KRT18P67-201ENST00000432816 1264 ntBASIC23.06■■□□□ 1.28
COL11A2P13942 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC23.06■■□□□ 1.28
COL11A2P13942 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC23.06■■□□□ 1.28
COL11A2P13942 AC005336.2-201ENST00000593183 939 ntBASIC23.06■■□□□ 1.28
COL11A2P13942 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
COL11A2P13942 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC23.06■■□□□ 1.28
COL11A2P13942 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
COL11A2P13942 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC23.06■■□□□ 1.28
COL11A2P13942 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.06■■□□□ 1.28
COL11A2P13942 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC23.06■■□□□ 1.28
COL11A2P13942 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
COL11A2P13942 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
COL11A2P13942 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
COL11A2P13942 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
COL11A2P13942 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL11A2P13942 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL11A2P13942 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
COL11A2P13942 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC23.05■■□□□ 1.28
COL11A2P13942 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL11A2P13942 VENTXP7-201ENST00000475503 772 ntBASIC23.05■■□□□ 1.28
COL11A2P13942 PPOX-214ENST00000535223 664 ntTSL 3 BASIC23.05■■□□□ 1.28
COL11A2P13942 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC23.05■■□□□ 1.28
COL11A2P13942 TPM1-218ENST00000559281 851 ntTSL 5 BASIC23.05■■□□□ 1.28
COL11A2P13942 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
COL11A2P13942 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL11A2P13942 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL11A2P13942 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
COL11A2P13942 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC23.05■■□□□ 1.28
COL11A2P13942 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC23.05■■□□□ 1.28
COL11A2P13942 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL11A2P13942 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
COL11A2P13942 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC23.05■■□□□ 1.28
COL11A2P13942 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL11A2P13942 RPP21-221ENST00000428040 594 ntTSL 2 BASIC23.05■■□□□ 1.28
COL11A2P13942 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL11A2P13942 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL11A2P13942 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC23.05■■□□□ 1.28
COL11A2P13942 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC23.05■■□□□ 1.28
COL11A2P13942 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC23.05■■□□□ 1.28
COL11A2P13942 CCNC-219ENST00000627680 896 ntTSL 5 BASIC23.05■■□□□ 1.28
COL11A2P13942 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL11A2P13942 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
COL11A2P13942 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL11A2P13942 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL11A2P13942 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL11A2P13942 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
COL11A2P13942 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL11A2P13942 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL11A2P13942 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL11A2P13942 RN7SL606P-201ENST00000472779 293 ntBASIC23.04■■□□□ 1.28
COL11A2P13942 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC23.04■■□□□ 1.28
COL11A2P13942 AC008608.2-201ENST00000606089 416 ntBASIC23.04■■□□□ 1.28
COL11A2P13942 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC23.04■■□□□ 1.28
COL11A2P13942 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
COL11A2P13942 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC23.04■■□□□ 1.28
COL11A2P13942 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL11A2P13942 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL11A2P13942 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC23.03■■□□□ 1.28
COL11A2P13942 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC23.03■■□□□ 1.28
COL11A2P13942 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
COL11A2P13942 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC23.03■■□□□ 1.28
COL11A2P13942 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL11A2P13942 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL11A2P13942 TLE1-202ENST00000376484 666 ntTSL 3 BASIC23.03■■□□□ 1.28
COL11A2P13942 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC23.03■■□□□ 1.28
COL11A2P13942 ABR-217ENST00000572441 563 ntTSL 4 BASIC23.03■■□□□ 1.28
COL11A2P13942 LINC01711-201ENST00000598340 967 ntBASIC23.03■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms