Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDGFAP04085 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDGFAP04085 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDGFAP04085 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDGFAP04085 SPDYE15P-201ENST00000424157 909 ntBASIC17.61■□□□□ 0.41
PDGFAP04085 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.61■□□□□ 0.41
PDGFAP04085 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.61■□□□□ 0.41
PDGFAP04085 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.61■□□□□ 0.41
PDGFAP04085 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.61■□□□□ 0.41
PDGFAP04085 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.61■□□□□ 0.41
PDGFAP04085 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.61■□□□□ 0.41
PDGFAP04085 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PDGFAP04085 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDGFAP04085 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
PDGFAP04085 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.61■□□□□ 0.41
PDGFAP04085 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.61■□□□□ 0.41
PDGFAP04085 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDGFAP04085 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.61■□□□□ 0.41
PDGFAP04085 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.61■□□□□ 0.41
PDGFAP04085 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDGFAP04085 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDGFAP04085 AP001271.2-201ENST00000624018 1556 ntBASIC17.61■□□□□ 0.41
PDGFAP04085 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.61■□□□□ 0.41
PDGFAP04085 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDGFAP04085 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PDGFAP04085 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.6■□□□□ 0.41
PDGFAP04085 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
PDGFAP04085 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.6■□□□□ 0.41
PDGFAP04085 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDGFAP04085 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDGFAP04085 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDGFAP04085 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDGFAP04085 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDGFAP04085 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDGFAP04085 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDGFAP04085 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
PDGFAP04085 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PDGFAP04085 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PDGFAP04085 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDGFAP04085 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
PDGFAP04085 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.6■□□□□ 0.41
PDGFAP04085 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.6■□□□□ 0.41
PDGFAP04085 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.6■□□□□ 0.41
PDGFAP04085 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDGFAP04085 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
PDGFAP04085 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDGFAP04085 KRT8P11-201ENST00000409686 1436 ntBASIC17.6■□□□□ 0.41
PDGFAP04085 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
PDGFAP04085 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDGFAP04085 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.6■□□□□ 0.41
PDGFAP04085 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDGFAP04085 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.6■□□□□ 0.41
PDGFAP04085 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDGFAP04085 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDGFAP04085 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.6■□□□□ 0.41
PDGFAP04085 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.6■□□□□ 0.41
PDGFAP04085 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
PDGFAP04085 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDGFAP04085 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.6■□□□□ 0.41
PDGFAP04085 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDGFAP04085 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.6■□□□□ 0.41
PDGFAP04085 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDGFAP04085 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDGFAP04085 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDGFAP04085 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDGFAP04085 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDGFAP04085 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PDGFAP04085 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDGFAP04085 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.59■□□□□ 0.41
PDGFAP04085 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.59■□□□□ 0.41
PDGFAP04085 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.59■□□□□ 0.41
PDGFAP04085 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.59■□□□□ 0.41
PDGFAP04085 LINC01311-201ENST00000565162 1445 ntBASIC17.59■□□□□ 0.41
PDGFAP04085 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDGFAP04085 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
PDGFAP04085 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PDGFAP04085 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDGFAP04085 SPDYE13P-201ENST00000445314 798 ntBASIC17.59■□□□□ 0.41
PDGFAP04085 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.59■□□□□ 0.41
PDGFAP04085 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDGFAP04085 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.59■□□□□ 0.41
PDGFAP04085 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDGFAP04085 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDGFAP04085 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDGFAP04085 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PDGFAP04085 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDGFAP04085 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDGFAP04085 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDGFAP04085 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
PDGFAP04085 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PDGFAP04085 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PDGFAP04085 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
PDGFAP04085 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.58■□□□□ 0.41
PDGFAP04085 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
PDGFAP04085 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
PDGFAP04085 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.58■□□□□ 0.4
PDGFAP04085 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PDGFAP04085 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
PDGFAP04085 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
PDGFAP04085 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms