Protein–RNA interactions for Protein: O94911

ABCA8, ATP-binding cassette sub-family A member 8, humanhuman

Predictions only

Length 1,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8O94911 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC29.35■■■□□ 2.29
ABCA8O94911 IGHV3-41-201ENST00000613121 348 ntBASIC29.35■■■□□ 2.29
ABCA8O94911 AC124864.1-201ENST00000623408 392 ntBASIC29.35■■■□□ 2.29
ABCA8O94911 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC29.35■■■□□ 2.29
ABCA8O94911 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC29.34■■■□□ 2.29
ABCA8O94911 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
ABCA8O94911 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
ABCA8O94911 PALM-208ENST00000592155 2272 ntTSL 4 BASIC29.34■■■□□ 2.29
ABCA8O94911 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC29.34■■■□□ 2.29
ABCA8O94911 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC29.34■■■□□ 2.29
ABCA8O94911 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
ABCA8O94911 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC29.34■■■□□ 2.29
ABCA8O94911 VENTXP7-201ENST00000475503 772 ntBASIC29.34■■■□□ 2.29
ABCA8O94911 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC29.34■■■□□ 2.29
ABCA8O94911 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC29.34■■■□□ 2.29
ABCA8O94911 ABR-217ENST00000572441 563 ntTSL 4 BASIC29.34■■■□□ 2.29
ABCA8O94911 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC29.34■■■□□ 2.29
ABCA8O94911 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC29.34■■■□□ 2.29
ABCA8O94911 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC29.33■■■□□ 2.29
ABCA8O94911 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC29.33■■■□□ 2.29
ABCA8O94911 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
ABCA8O94911 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC29.33■■■□□ 2.29
ABCA8O94911 MIR564-202ENST00000385049 94 ntBASIC29.33■■■□□ 2.29
ABCA8O94911 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC29.33■■■□□ 2.29
ABCA8O94911 AC024563.2-201ENST00000603282 481 ntBASIC29.33■■■□□ 2.29
ABCA8O94911 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
ABCA8O94911 MED17-221ENST00000639724 2317 ntTSL 5 BASIC29.33■■■□□ 2.29
ABCA8O94911 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC29.33■■■□□ 2.29
ABCA8O94911 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
ABCA8O94911 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
ABCA8O94911 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC29.32■■■□□ 2.28
ABCA8O94911 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC29.32■■■□□ 2.28
ABCA8O94911 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC29.32■■■□□ 2.28
ABCA8O94911 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC29.32■■■□□ 2.28
ABCA8O94911 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
ABCA8O94911 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC29.32■■■□□ 2.28
ABCA8O94911 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC29.32■■■□□ 2.28
ABCA8O94911 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC29.32■■■□□ 2.28
ABCA8O94911 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC29.32■■■□□ 2.28
ABCA8O94911 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
ABCA8O94911 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC29.32■■■□□ 2.28
ABCA8O94911 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
ABCA8O94911 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
ABCA8O94911 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC29.31■■■□□ 2.28
ABCA8O94911 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
ABCA8O94911 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
ABCA8O94911 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
ABCA8O94911 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC29.31■■■□□ 2.28
ABCA8O94911 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC29.31■■■□□ 2.28
ABCA8O94911 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
ABCA8O94911 KRT8P32-201ENST00000512863 1461 ntBASIC29.31■■■□□ 2.28
ABCA8O94911 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
ABCA8O94911 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
ABCA8O94911 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC29.31■■■□□ 2.28
ABCA8O94911 ABBA01031661.1-201ENST00000634362 1253 ntBASIC29.31■■■□□ 2.28
ABCA8O94911 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC29.31■■■□□ 2.28
ABCA8O94911 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC29.31■■■□□ 2.28
ABCA8O94911 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC29.31■■■□□ 2.28
ABCA8O94911 AC034236.2-201ENST00000606662 1610 ntBASIC29.31■■■□□ 2.28
ABCA8O94911 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
ABCA8O94911 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
ABCA8O94911 AL031284.1-201ENST00000419297 478 ntBASIC29.3■■■□□ 2.28
ABCA8O94911 KRT18P58-201ENST00000527480 1120 ntBASIC29.3■■■□□ 2.28
ABCA8O94911 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC29.3■■■□□ 2.28
ABCA8O94911 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC29.3■■■□□ 2.28
ABCA8O94911 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC29.3■■■□□ 2.28
ABCA8O94911 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
ABCA8O94911 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
ABCA8O94911 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
ABCA8O94911 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
ABCA8O94911 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
ABCA8O94911 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
ABCA8O94911 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
ABCA8O94911 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
ABCA8O94911 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
ABCA8O94911 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC29.3■■■□□ 2.28
ABCA8O94911 MED22-202ENST00000371999 987 ntTSL 3 BASIC29.3■■■□□ 2.28
ABCA8O94911 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC29.3■■■□□ 2.28
ABCA8O94911 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
ABCA8O94911 GUSBP12-201ENST00000513727 720 ntBASIC29.3■■■□□ 2.28
ABCA8O94911 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC29.29■■■□□ 2.28
ABCA8O94911 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC29.29■■■□□ 2.28
ABCA8O94911 USP39-204ENST00000409766 2033 ntTSL 2 BASIC29.29■■■□□ 2.28
ABCA8O94911 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC29.29■■■□□ 2.28
ABCA8O94911 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
ABCA8O94911 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC29.29■■■□□ 2.28
ABCA8O94911 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC29.29■■■□□ 2.28
ABCA8O94911 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
ABCA8O94911 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
ABCA8O94911 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
ABCA8O94911 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
ABCA8O94911 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
ABCA8O94911 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
ABCA8O94911 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC29.28■■■□□ 2.28
ABCA8O94911 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC29.28■■■□□ 2.28
ABCA8O94911 AC006333.2-201ENST00000607957 2099 ntBASIC29.28■■■□□ 2.28
ABCA8O94911 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
ABCA8O94911 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
ABCA8O94911 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC29.28■■■□□ 2.28
ABCA8O94911 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms