Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
GFRA3O60609 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.31■□□□□ 0.52
GFRA3O60609 AC010240.3-201ENST00000607688 395 ntBASIC18.31■□□□□ 0.52
GFRA3O60609 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.31■□□□□ 0.52
GFRA3O60609 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
GFRA3O60609 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GFRA3O60609 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GFRA3O60609 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GFRA3O60609 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GFRA3O60609 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GFRA3O60609 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GFRA3O60609 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GFRA3O60609 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
GFRA3O60609 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
GFRA3O60609 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GFRA3O60609 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GFRA3O60609 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GFRA3O60609 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
GFRA3O60609 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.31■□□□□ 0.52
GFRA3O60609 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GFRA3O60609 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
GFRA3O60609 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
GFRA3O60609 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.3■□□□□ 0.52
GFRA3O60609 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GFRA3O60609 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GFRA3O60609 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
GFRA3O60609 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.3■□□□□ 0.52
GFRA3O60609 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
GFRA3O60609 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.3■□□□□ 0.52
GFRA3O60609 AC007274.1-201ENST00000439805 662 ntBASIC18.3■□□□□ 0.52
GFRA3O60609 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
GFRA3O60609 YBX1P5-201ENST00000509441 847 ntBASIC18.3■□□□□ 0.52
GFRA3O60609 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.3■□□□□ 0.52
GFRA3O60609 OR7E14P-202ENST00000530490 1290 ntBASIC18.3■□□□□ 0.52
GFRA3O60609 AC012640.2-201ENST00000561606 901 ntBASIC18.3■□□□□ 0.52
GFRA3O60609 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
GFRA3O60609 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GFRA3O60609 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.3■□□□□ 0.52
GFRA3O60609 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.3■□□□□ 0.52
GFRA3O60609 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GFRA3O60609 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GFRA3O60609 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
GFRA3O60609 TREX1-205ENST00000625293 1783 ntBASIC18.3■□□□□ 0.52
GFRA3O60609 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GFRA3O60609 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
GFRA3O60609 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
GFRA3O60609 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GFRA3O60609 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GFRA3O60609 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.29■□□□□ 0.52
GFRA3O60609 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.29■□□□□ 0.52
GFRA3O60609 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GFRA3O60609 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
GFRA3O60609 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
GFRA3O60609 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.29■□□□□ 0.52
GFRA3O60609 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GFRA3O60609 UNC93B6-202ENST00000528242 690 ntBASIC18.29■□□□□ 0.52
GFRA3O60609 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.29■□□□□ 0.52
GFRA3O60609 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC18.29■□□□□ 0.52
GFRA3O60609 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.29■□□□□ 0.52
GFRA3O60609 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC18.29■□□□□ 0.52
GFRA3O60609 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
GFRA3O60609 AC005336.2-201ENST00000593183 939 ntBASIC18.29■□□□□ 0.52
GFRA3O60609 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
GFRA3O60609 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.29■□□□□ 0.52
GFRA3O60609 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
GFRA3O60609 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
GFRA3O60609 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.29■□□□□ 0.52
GFRA3O60609 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GFRA3O60609 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
GFRA3O60609 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GFRA3O60609 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
GFRA3O60609 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
GFRA3O60609 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GFRA3O60609 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
GFRA3O60609 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
GFRA3O60609 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.28■□□□□ 0.52
GFRA3O60609 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GFRA3O60609 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
GFRA3O60609 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GFRA3O60609 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18.28■□□□□ 0.52
GFRA3O60609 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.28■□□□□ 0.52
GFRA3O60609 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.28■□□□□ 0.52
GFRA3O60609 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.28■□□□□ 0.52
GFRA3O60609 AF228730.6-201ENST00000641497 218 ntBASIC18.28■□□□□ 0.52
GFRA3O60609 AC084121.3-201ENST00000641716 218 ntBASIC18.28■□□□□ 0.52
GFRA3O60609 AC105233.6-201ENST00000642093 218 ntBASIC18.28■□□□□ 0.52
GFRA3O60609 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
GFRA3O60609 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
GFRA3O60609 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
GFRA3O60609 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.28■□□□□ 0.52
GFRA3O60609 AL353692.3-201ENST00000407031 1396 ntBASIC18.28■□□□□ 0.52
GFRA3O60609 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
GFRA3O60609 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
GFRA3O60609 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GFRA3O60609 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GFRA3O60609 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.27■□□□□ 0.52
GFRA3O60609 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.27■□□□□ 0.52
GFRA3O60609 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
GFRA3O60609 KRT8P3-201ENST00000519669 1449 ntBASIC18.27■□□□□ 0.52
GFRA3O60609 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms