Protein–RNA interactions for Protein: O60506

SYNCRIP, Heterogeneous nuclear ribonucleoprotein Q, humanhuman

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIPO60506 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SYNCRIPO60506 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SYNCRIPO60506 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SYNCRIPO60506 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SYNCRIPO60506 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SYNCRIPO60506 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SYNCRIPO60506 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.26■□□□□ 0.67
SYNCRIPO60506 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SYNCRIPO60506 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SYNCRIPO60506 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SYNCRIPO60506 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.26■□□□□ 0.67
SYNCRIPO60506 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SYNCRIPO60506 UPK3BP1-201ENST00000428678 509 ntBASIC19.26■□□□□ 0.67
SYNCRIPO60506 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.26■□□□□ 0.67
SYNCRIPO60506 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.26■□□□□ 0.67
SYNCRIPO60506 AL359075.1-203ENST00000462729 1002 ntBASIC19.26■□□□□ 0.67
SYNCRIPO60506 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.26■□□□□ 0.67
SYNCRIPO60506 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.26■□□□□ 0.67
SYNCRIPO60506 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.26■□□□□ 0.67
SYNCRIPO60506 AL441883.1-201ENST00000566170 1045 ntBASIC19.26■□□□□ 0.67
SYNCRIPO60506 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.26■□□□□ 0.67
SYNCRIPO60506 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.26■□□□□ 0.67
SYNCRIPO60506 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
SYNCRIPO60506 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SYNCRIPO60506 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SYNCRIPO60506 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.26■□□□□ 0.67
SYNCRIPO60506 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SYNCRIPO60506 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SYNCRIPO60506 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SYNCRIPO60506 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SYNCRIPO60506 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.26■□□□□ 0.67
SYNCRIPO60506 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SYNCRIPO60506 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.25■□□□□ 0.67
SYNCRIPO60506 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
SYNCRIPO60506 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SYNCRIPO60506 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.25■□□□□ 0.67
SYNCRIPO60506 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SYNCRIPO60506 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.25■□□□□ 0.67
SYNCRIPO60506 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SYNCRIPO60506 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.25■□□□□ 0.67
SYNCRIPO60506 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.25■□□□□ 0.67
SYNCRIPO60506 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.25■□□□□ 0.67
SYNCRIPO60506 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SYNCRIPO60506 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.25■□□□□ 0.67
SYNCRIPO60506 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SYNCRIPO60506 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SYNCRIPO60506 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.25■□□□□ 0.67
SYNCRIPO60506 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SYNCRIPO60506 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.25■□□□□ 0.67
SYNCRIPO60506 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SYNCRIPO60506 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SYNCRIPO60506 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SYNCRIPO60506 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SYNCRIPO60506 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.25■□□□□ 0.67
SYNCRIPO60506 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.25■□□□□ 0.67
SYNCRIPO60506 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SYNCRIPO60506 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SYNCRIPO60506 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SYNCRIPO60506 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SYNCRIPO60506 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SYNCRIPO60506 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SYNCRIPO60506 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.24■□□□□ 0.67
SYNCRIPO60506 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SYNCRIPO60506 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SYNCRIPO60506 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SYNCRIPO60506 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SYNCRIPO60506 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.24■□□□□ 0.67
SYNCRIPO60506 AC009947.2-201ENST00000444014 672 ntBASIC19.24■□□□□ 0.67
SYNCRIPO60506 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.24■□□□□ 0.67
SYNCRIPO60506 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.24■□□□□ 0.67
SYNCRIPO60506 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.24■□□□□ 0.67
SYNCRIPO60506 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.24■□□□□ 0.67
SYNCRIPO60506 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SYNCRIPO60506 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SYNCRIPO60506 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.24■□□□□ 0.67
SYNCRIPO60506 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.24■□□□□ 0.67
SYNCRIPO60506 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SYNCRIPO60506 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SYNCRIPO60506 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SYNCRIPO60506 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SYNCRIPO60506 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SYNCRIPO60506 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SYNCRIPO60506 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SYNCRIPO60506 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
SYNCRIPO60506 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SYNCRIPO60506 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.23■□□□□ 0.67
SYNCRIPO60506 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.23■□□□□ 0.67
SYNCRIPO60506 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
SYNCRIPO60506 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.23■□□□□ 0.67
SYNCRIPO60506 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SYNCRIPO60506 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SYNCRIPO60506 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SYNCRIPO60506 TSPY23P-201ENST00000440136 739 ntBASIC19.23■□□□□ 0.67
SYNCRIPO60506 AL671277.2-201ENST00000458060 996 ntBASIC19.23■□□□□ 0.67
SYNCRIPO60506 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
SYNCRIPO60506 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.23■□□□□ 0.67
SYNCRIPO60506 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.23■□□□□ 0.67
SYNCRIPO60506 NEK4P2-201ENST00000580004 1012 ntBASIC19.23■□□□□ 0.67
SYNCRIPO60506 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.23■□□□□ 0.67
SYNCRIPO60506 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms