Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
IDH3BO43837 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.31■□□□□ 0.36
IDH3BO43837 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
IDH3BO43837 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
IDH3BO43837 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
IDH3BO43837 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
IDH3BO43837 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
IDH3BO43837 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
IDH3BO43837 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.31■□□□□ 0.36
IDH3BO43837 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
IDH3BO43837 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
IDH3BO43837 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
IDH3BO43837 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
IDH3BO43837 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IDH3BO43837 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
IDH3BO43837 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
IDH3BO43837 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
IDH3BO43837 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.3■□□□□ 0.36
IDH3BO43837 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IDH3BO43837 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
IDH3BO43837 AC006333.2-201ENST00000607957 2099 ntBASIC17.3■□□□□ 0.36
IDH3BO43837 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
IDH3BO43837 FP475955.4-201ENST00000623131 1990 ntBASIC17.3■□□□□ 0.36
IDH3BO43837 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
IDH3BO43837 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IDH3BO43837 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IDH3BO43837 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.3■□□□□ 0.36
IDH3BO43837 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IDH3BO43837 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.3■□□□□ 0.36
IDH3BO43837 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
IDH3BO43837 TUBB8P6-201ENST00000436895 1288 ntBASIC17.3■□□□□ 0.36
IDH3BO43837 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.3■□□□□ 0.36
IDH3BO43837 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.3■□□□□ 0.36
IDH3BO43837 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.3■□□□□ 0.36
IDH3BO43837 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IDH3BO43837 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.3■□□□□ 0.36
IDH3BO43837 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IDH3BO43837 AC011270.2-201ENST00000624293 2550 ntBASIC17.3■□□□□ 0.36
IDH3BO43837 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IDH3BO43837 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IDH3BO43837 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
IDH3BO43837 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IDH3BO43837 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IDH3BO43837 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
IDH3BO43837 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.29■□□□□ 0.36
IDH3BO43837 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.29■□□□□ 0.36
IDH3BO43837 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
IDH3BO43837 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.29■□□□□ 0.36
IDH3BO43837 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
IDH3BO43837 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.29■□□□□ 0.36
IDH3BO43837 AC104581.1-202ENST00000635932 2618 ntBASIC17.29■□□□□ 0.36
IDH3BO43837 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IDH3BO43837 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IDH3BO43837 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.29■□□□□ 0.36
IDH3BO43837 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.29■□□□□ 0.36
IDH3BO43837 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.29■□□□□ 0.36
IDH3BO43837 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.29■□□□□ 0.36
IDH3BO43837 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.29■□□□□ 0.36
IDH3BO43837 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IDH3BO43837 SDHAP1-207ENST00000440850 2000 ntBASIC17.29■□□□□ 0.36
IDH3BO43837 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
IDH3BO43837 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
IDH3BO43837 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.29■□□□□ 0.36
IDH3BO43837 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
IDH3BO43837 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
IDH3BO43837 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
IDH3BO43837 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IDH3BO43837 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
IDH3BO43837 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.29■□□□□ 0.36
IDH3BO43837 NOC2LP2-201ENST00000407594 1944 ntBASIC17.29■□□□□ 0.36
IDH3BO43837 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
IDH3BO43837 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.29■□□□□ 0.36
IDH3BO43837 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.28■□□□□ 0.36
IDH3BO43837 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IDH3BO43837 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
IDH3BO43837 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
IDH3BO43837 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
IDH3BO43837 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
IDH3BO43837 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IDH3BO43837 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
IDH3BO43837 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
IDH3BO43837 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
IDH3BO43837 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.28■□□□□ 0.36
IDH3BO43837 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
IDH3BO43837 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.28■□□□□ 0.36
IDH3BO43837 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.28■□□□□ 0.36
IDH3BO43837 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.28■□□□□ 0.36
IDH3BO43837 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
IDH3BO43837 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.28■□□□□ 0.36
IDH3BO43837 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.28■□□□□ 0.36
IDH3BO43837 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.28■□□□□ 0.36
IDH3BO43837 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.28■□□□□ 0.36
IDH3BO43837 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IDH3BO43837 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
IDH3BO43837 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.28■□□□□ 0.36
IDH3BO43837 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
IDH3BO43837 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
IDH3BO43837 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IDH3BO43837 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
IDH3BO43837 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms