Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC12.92□□□□□ -0.34
NDUFA1O15239 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NDUFA1O15239 PRORSD1P-202ENST00000563365 2154 ntBASIC12.92□□□□□ -0.34
NDUFA1O15239 AC133552.2-202ENST00000575694 574 ntBASIC12.92□□□□□ -0.34
NDUFA1O15239 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC12.92□□□□□ -0.34
NDUFA1O15239 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NDUFA1O15239 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NDUFA1O15239 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
NDUFA1O15239 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NDUFA1O15239 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC12.92□□□□□ -0.34
NDUFA1O15239 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC12.92□□□□□ -0.34
NDUFA1O15239 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC12.92□□□□□ -0.34
NDUFA1O15239 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NDUFA1O15239 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC12.92□□□□□ -0.34
NDUFA1O15239 MOK-233ENST00000524214 1539 ntTSL 2 BASIC12.92□□□□□ -0.34
NDUFA1O15239 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NDUFA1O15239 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NDUFA1O15239 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
NDUFA1O15239 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NDUFA1O15239 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NDUFA1O15239 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NDUFA1O15239 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NDUFA1O15239 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NDUFA1O15239 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NDUFA1O15239 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
NDUFA1O15239 AC116351.2-201ENST00000606540 1585 ntBASIC12.91□□□□□ -0.34
NDUFA1O15239 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
NDUFA1O15239 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
NDUFA1O15239 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NDUFA1O15239 AF201337.1-201ENST00000520239 748 ntBASIC12.91□□□□□ -0.34
NDUFA1O15239 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NDUFA1O15239 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NDUFA1O15239 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC12.91□□□□□ -0.34
NDUFA1O15239 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC12.91□□□□□ -0.34
NDUFA1O15239 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NDUFA1O15239 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC12.91□□□□□ -0.34
NDUFA1O15239 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
NDUFA1O15239 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
NDUFA1O15239 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NDUFA1O15239 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC12.91□□□□□ -0.34
NDUFA1O15239 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
NDUFA1O15239 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NDUFA1O15239 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NDUFA1O15239 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NDUFA1O15239 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC12.91□□□□□ -0.34
NDUFA1O15239 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
NDUFA1O15239 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NDUFA1O15239 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC12.9□□□□□ -0.34
NDUFA1O15239 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
NDUFA1O15239 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NDUFA1O15239 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC12.9□□□□□ -0.34
NDUFA1O15239 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
NDUFA1O15239 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC12.9□□□□□ -0.34
NDUFA1O15239 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC12.9□□□□□ -0.34
NDUFA1O15239 AC008764.6-201ENST00000595909 2069 ntBASIC12.9□□□□□ -0.34
NDUFA1O15239 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NDUFA1O15239 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NDUFA1O15239 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
NDUFA1O15239 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NDUFA1O15239 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
NDUFA1O15239 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NDUFA1O15239 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC12.9□□□□□ -0.34
NDUFA1O15239 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
NDUFA1O15239 GPX1P1-201ENST00000388829 606 ntBASIC12.9□□□□□ -0.34
NDUFA1O15239 SERP1-205ENST00000487153 657 ntTSL 4 BASIC12.9□□□□□ -0.34
NDUFA1O15239 PHB2-213ENST00000546111 858 ntTSL 2 BASIC12.9□□□□□ -0.34
NDUFA1O15239 AC105036.2-201ENST00000569468 176 ntBASIC12.9□□□□□ -0.34
NDUFA1O15239 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
NDUFA1O15239 AC022517.1-201ENST00000592429 346 ntBASIC12.9□□□□□ -0.34
NDUFA1O15239 AC083906.6-201ENST00000641366 219 ntBASIC12.9□□□□□ -0.34
NDUFA1O15239 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NDUFA1O15239 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
NDUFA1O15239 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NDUFA1O15239 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC12.9□□□□□ -0.34
NDUFA1O15239 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC12.9□□□□□ -0.34
NDUFA1O15239 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NDUFA1O15239 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
NDUFA1O15239 CRK-204ENST00000574295 1391 ntTSL 5 BASIC12.9□□□□□ -0.34
NDUFA1O15239 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NDUFA1O15239 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NDUFA1O15239 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
NDUFA1O15239 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC12.9□□□□□ -0.34
NDUFA1O15239 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
NDUFA1O15239 AC073592.3-201ENST00000625118 1834 ntBASIC12.9□□□□□ -0.34
NDUFA1O15239 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.35
NDUFA1O15239 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.35
NDUFA1O15239 CD276-201ENST00000318424 2738 ntTSL 5 BASIC12.9□□□□□ -0.35
NDUFA1O15239 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
NDUFA1O15239 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NDUFA1O15239 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
NDUFA1O15239 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC12.89□□□□□ -0.35
NDUFA1O15239 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
NDUFA1O15239 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NDUFA1O15239 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
NDUFA1O15239 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
NDUFA1O15239 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
NDUFA1O15239 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NDUFA1O15239 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NDUFA1O15239 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NDUFA1O15239 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms