Protein–RNA interactions for Protein: O00305

CACNB4, Voltage-dependent L-type calcium channel subunit beta-4, humanhuman

Predicted RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4O00305 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CACNB4O00305 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CACNB4O00305 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CACNB4O00305 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CACNB4O00305 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.64■□□□□ 0.57
CACNB4O00305 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
CACNB4O00305 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.64■□□□□ 0.57
CACNB4O00305 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CACNB4O00305 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CACNB4O00305 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CACNB4O00305 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.64■□□□□ 0.57
CACNB4O00305 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CACNB4O00305 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CACNB4O00305 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CACNB4O00305 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CACNB4O00305 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.63■□□□□ 0.57
CACNB4O00305 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CACNB4O00305 FEM1AP3-201ENST00000403722 1741 ntBASIC18.63■□□□□ 0.57
CACNB4O00305 BX323043.1-201ENST00000641006 1765 ntBASIC18.63■□□□□ 0.57
CACNB4O00305 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.63■□□□□ 0.57
CACNB4O00305 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CACNB4O00305 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CACNB4O00305 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.63■□□□□ 0.57
CACNB4O00305 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.63■□□□□ 0.57
CACNB4O00305 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.63■□□□□ 0.57
CACNB4O00305 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.63■□□□□ 0.57
CACNB4O00305 AL441883.1-201ENST00000566170 1045 ntBASIC18.63■□□□□ 0.57
CACNB4O00305 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.63■□□□□ 0.57
CACNB4O00305 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CACNB4O00305 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CACNB4O00305 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CACNB4O00305 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.63■□□□□ 0.57
CACNB4O00305 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CACNB4O00305 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CACNB4O00305 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
CACNB4O00305 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.63■□□□□ 0.57
CACNB4O00305 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CACNB4O00305 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CACNB4O00305 AC141586.3-201ENST00000562166 1838 ntBASIC18.63■□□□□ 0.57
CACNB4O00305 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CACNB4O00305 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CACNB4O00305 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CACNB4O00305 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CACNB4O00305 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.62■□□□□ 0.57
CACNB4O00305 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.62■□□□□ 0.57
CACNB4O00305 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.62■□□□□ 0.57
CACNB4O00305 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CACNB4O00305 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CACNB4O00305 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CACNB4O00305 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CACNB4O00305 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.62■□□□□ 0.57
CACNB4O00305 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CACNB4O00305 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CACNB4O00305 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CACNB4O00305 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.62■□□□□ 0.57
CACNB4O00305 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CACNB4O00305 IRX1P1-201ENST00000438849 1838 ntBASIC18.62■□□□□ 0.57
CACNB4O00305 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.62■□□□□ 0.57
CACNB4O00305 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CACNB4O00305 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CACNB4O00305 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CACNB4O00305 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CACNB4O00305 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CACNB4O00305 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CACNB4O00305 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CACNB4O00305 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CACNB4O00305 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CACNB4O00305 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.61■□□□□ 0.57
CACNB4O00305 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CACNB4O00305 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.61■□□□□ 0.57
CACNB4O00305 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CACNB4O00305 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CACNB4O00305 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CACNB4O00305 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CACNB4O00305 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
CACNB4O00305 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.61■□□□□ 0.57
CACNB4O00305 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CACNB4O00305 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.61■□□□□ 0.57
CACNB4O00305 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CACNB4O00305 MIR3180-5-201ENST00000583743 153 ntBASIC18.61■□□□□ 0.57
CACNB4O00305 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CACNB4O00305 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CACNB4O00305 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CACNB4O00305 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.61■□□□□ 0.57
CACNB4O00305 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CACNB4O00305 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CACNB4O00305 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.61■□□□□ 0.57
CACNB4O00305 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CACNB4O00305 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CACNB4O00305 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CACNB4O00305 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CACNB4O00305 AC036111.1-201ENST00000533973 1582 ntBASIC18.6■□□□□ 0.57
CACNB4O00305 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CACNB4O00305 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.6■□□□□ 0.57
CACNB4O00305 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.6■□□□□ 0.57
CACNB4O00305 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CACNB4O00305 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CACNB4O00305 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.6■□□□□ 0.57
CACNB4O00305 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.6■□□□□ 0.57
CACNB4O00305 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms