Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEF25A6NGN4 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.71■□□□□ 0.43
PRAMEF25A6NGN4 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PRAMEF25A6NGN4 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PRAMEF25A6NGN4 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEF25A6NGN4 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEF25A6NGN4 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.71■□□□□ 0.43
PRAMEF25A6NGN4 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.71■□□□□ 0.43
PRAMEF25A6NGN4 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEF25A6NGN4 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEF25A6NGN4 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEF25A6NGN4 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.71■□□□□ 0.43
PRAMEF25A6NGN4 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.71■□□□□ 0.42
PRAMEF25A6NGN4 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF25A6NGN4 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF25A6NGN4 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.7■□□□□ 0.42
PRAMEF25A6NGN4 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF25A6NGN4 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF25A6NGN4 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF25A6NGN4 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF25A6NGN4 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF25A6NGN4 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF25A6NGN4 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF25A6NGN4 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.7■□□□□ 0.42
PRAMEF25A6NGN4 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF25A6NGN4 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.7■□□□□ 0.42
PRAMEF25A6NGN4 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.7■□□□□ 0.42
PRAMEF25A6NGN4 NUDT16P1-203ENST00000513809 620 ntBASIC17.7■□□□□ 0.42
PRAMEF25A6NGN4 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.7■□□□□ 0.42
PRAMEF25A6NGN4 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.7■□□□□ 0.42
PRAMEF25A6NGN4 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.7■□□□□ 0.42
PRAMEF25A6NGN4 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF25A6NGN4 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF25A6NGN4 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF25A6NGN4 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF25A6NGN4 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF25A6NGN4 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF25A6NGN4 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.7■□□□□ 0.42
PRAMEF25A6NGN4 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
PRAMEF25A6NGN4 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF25A6NGN4 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF25A6NGN4 AL390961.4-201ENST00000623958 2535 ntBASIC17.69■□□□□ 0.42
PRAMEF25A6NGN4 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF25A6NGN4 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.69■□□□□ 0.42
PRAMEF25A6NGN4 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF25A6NGN4 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.69■□□□□ 0.42
PRAMEF25A6NGN4 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF25A6NGN4 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.69■□□□□ 0.42
PRAMEF25A6NGN4 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.69■□□□□ 0.42
PRAMEF25A6NGN4 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF25A6NGN4 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
PRAMEF25A6NGN4 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF25A6NGN4 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.69■□□□□ 0.42
PRAMEF25A6NGN4 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.69■□□□□ 0.42
PRAMEF25A6NGN4 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PRAMEF25A6NGN4 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.69■□□□□ 0.42
PRAMEF25A6NGN4 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PRAMEF25A6NGN4 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
PRAMEF25A6NGN4 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF25A6NGN4 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
PRAMEF25A6NGN4 KRT17P2-201ENST00000300992 1314 ntBASIC17.69■□□□□ 0.42
PRAMEF25A6NGN4 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
PRAMEF25A6NGN4 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF25A6NGN4 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF25A6NGN4 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF25A6NGN4 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF25A6NGN4 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.69■□□□□ 0.42
PRAMEF25A6NGN4 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF25A6NGN4 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF25A6NGN4 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF25A6NGN4 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF25A6NGN4 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF25A6NGN4 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF25A6NGN4 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF25A6NGN4 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF25A6NGN4 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF25A6NGN4 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF25A6NGN4 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.68■□□□□ 0.42
PRAMEF25A6NGN4 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.68■□□□□ 0.42
PRAMEF25A6NGN4 AP003071.4-201ENST00000562276 1284 ntBASIC17.68■□□□□ 0.42
PRAMEF25A6NGN4 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PRAMEF25A6NGN4 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.68■□□□□ 0.42
PRAMEF25A6NGN4 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
PRAMEF25A6NGN4 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.68■□□□□ 0.42
PRAMEF25A6NGN4 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF25A6NGN4 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.68■□□□□ 0.42
PRAMEF25A6NGN4 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.68■□□□□ 0.42
PRAMEF25A6NGN4 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.68■□□□□ 0.42
PRAMEF25A6NGN4 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF25A6NGN4 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF25A6NGN4 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
PRAMEF25A6NGN4 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.68■□□□□ 0.42
PRAMEF25A6NGN4 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF25A6NGN4 BICD1-207ENST00000551848 1962 ntBASIC17.68■□□□□ 0.42
PRAMEF25A6NGN4 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.67■□□□□ 0.42
PRAMEF25A6NGN4 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEF25A6NGN4 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEF25A6NGN4 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.67■□□□□ 0.42
PRAMEF25A6NGN4 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
PRAMEF25A6NGN4 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms