Protein–RNA interactions for Protein: A6NFA1

TRABD2B, Metalloprotease TIKI2, humanhuman

Predictions only

Length 517 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2BA6NFA1 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRABD2BA6NFA1 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
TRABD2BA6NFA1 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.12■□□□□ 0.49
TRABD2BA6NFA1 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.12■□□□□ 0.49
TRABD2BA6NFA1 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
TRABD2BA6NFA1 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRABD2BA6NFA1 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRABD2BA6NFA1 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.11■□□□□ 0.49
TRABD2BA6NFA1 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRABD2BA6NFA1 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRABD2BA6NFA1 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRABD2BA6NFA1 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TRABD2BA6NFA1 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRABD2BA6NFA1 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRABD2BA6NFA1 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.11■□□□□ 0.49
TRABD2BA6NFA1 CHCHD2P8-201ENST00000429873 447 ntBASIC18.11■□□□□ 0.49
TRABD2BA6NFA1 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRABD2BA6NFA1 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.11■□□□□ 0.49
TRABD2BA6NFA1 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRABD2BA6NFA1 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
TRABD2BA6NFA1 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.11■□□□□ 0.49
TRABD2BA6NFA1 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.11■□□□□ 0.49
TRABD2BA6NFA1 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
TRABD2BA6NFA1 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRABD2BA6NFA1 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.11■□□□□ 0.49
TRABD2BA6NFA1 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRABD2BA6NFA1 AC087289.5-201ENST00000586076 3175 ntBASIC18.1■□□□□ 0.49
TRABD2BA6NFA1 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRABD2BA6NFA1 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRABD2BA6NFA1 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.1■□□□□ 0.49
TRABD2BA6NFA1 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRABD2BA6NFA1 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.1■□□□□ 0.49
TRABD2BA6NFA1 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRABD2BA6NFA1 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRABD2BA6NFA1 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.1■□□□□ 0.49
TRABD2BA6NFA1 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.1■□□□□ 0.49
TRABD2BA6NFA1 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRABD2BA6NFA1 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRABD2BA6NFA1 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRABD2BA6NFA1 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRABD2BA6NFA1 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
TRABD2BA6NFA1 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRABD2BA6NFA1 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRABD2BA6NFA1 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.1■□□□□ 0.49
TRABD2BA6NFA1 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRABD2BA6NFA1 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRABD2BA6NFA1 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRABD2BA6NFA1 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRABD2BA6NFA1 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.1■□□□□ 0.49
TRABD2BA6NFA1 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
TRABD2BA6NFA1 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.1■□□□□ 0.49
TRABD2BA6NFA1 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRABD2BA6NFA1 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.1■□□□□ 0.49
TRABD2BA6NFA1 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRABD2BA6NFA1 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRABD2BA6NFA1 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.1■□□□□ 0.49
TRABD2BA6NFA1 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRABD2BA6NFA1 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRABD2BA6NFA1 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRABD2BA6NFA1 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.09■□□□□ 0.49
TRABD2BA6NFA1 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.09■□□□□ 0.49
TRABD2BA6NFA1 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRABD2BA6NFA1 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRABD2BA6NFA1 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRABD2BA6NFA1 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.09■□□□□ 0.49
TRABD2BA6NFA1 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRABD2BA6NFA1 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRABD2BA6NFA1 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
TRABD2BA6NFA1 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.09■□□□□ 0.49
TRABD2BA6NFA1 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRABD2BA6NFA1 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
TRABD2BA6NFA1 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
TRABD2BA6NFA1 AP000867.3-201ENST00000524675 377 ntBASIC18.09■□□□□ 0.49
TRABD2BA6NFA1 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
TRABD2BA6NFA1 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.09■□□□□ 0.49
TRABD2BA6NFA1 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.09■□□□□ 0.49
TRABD2BA6NFA1 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.09■□□□□ 0.49
TRABD2BA6NFA1 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TRABD2BA6NFA1 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.09■□□□□ 0.49
TRABD2BA6NFA1 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.09■□□□□ 0.49
TRABD2BA6NFA1 AC139530.3-201ENST00000620344 690 ntBASIC18.09■□□□□ 0.49
TRABD2BA6NFA1 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
TRABD2BA6NFA1 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TRABD2BA6NFA1 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRABD2BA6NFA1 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.09■□□□□ 0.49
TRABD2BA6NFA1 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRABD2BA6NFA1 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRABD2BA6NFA1 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRABD2BA6NFA1 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.09■□□□□ 0.49
TRABD2BA6NFA1 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.09■□□□□ 0.49
TRABD2BA6NFA1 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.09■□□□□ 0.49
TRABD2BA6NFA1 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRABD2BA6NFA1 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRABD2BA6NFA1 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRABD2BA6NFA1 AL162741.1-201ENST00000565563 1558 ntBASIC18.08■□□□□ 0.49
TRABD2BA6NFA1 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRABD2BA6NFA1 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.08■□□□□ 0.49
TRABD2BA6NFA1 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRABD2BA6NFA1 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRABD2BA6NFA1 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms